Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 KCTD9P4-201ENST00000526766 1166 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AP002004.1-206ENST00000532441 876 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 RN7SL32P-201ENST00000580514 281 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC090774.2-201ENST00000584708 322 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC099777.1-201ENST00000603779 1070 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AL078624.2-201ENST00000605063 554 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AP001264.1-201ENST00000620602 703 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 AC087392.3-202ENST00000358446 1754 ntBASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.51□□□□□ -1.37
ZNF549Q6P9A3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC010132.4-201ENST00000569883 1368 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 PPIAP24-201ENST00000328558 471 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 FDPSP5-201ENST00000399474 1057 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AL023284.3-201ENST00000407767 334 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 RPL6P21-201ENST00000418672 846 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 TVP23CP1-201ENST00000450317 639 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 RN7SL372P-201ENST00000461982 298 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 RN7SL70P-201ENST00000478322 302 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 RPL5P14-201ENST00000494197 878 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 H3F3AP3-201ENST00000497682 407 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 SCARNA5-201ENST00000516201 276 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 RN7SKP196-201ENST00000516267 345 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 SLC25A51P2-201ENST00000535708 889 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AL162632.2-201ENST00000553933 399 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 BMS1P16-201ENST00000556075 1147 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC010287.1-201ENST00000566916 357 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 OR7E19P-202ENST00000589942 844 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 MIR6849-201ENST00000618543 69 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AC012254.5-201ENST00000623573 478 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 AL121936.2-201ENST00000641935 662 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZNF549Q6P9A3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
ZNF549Q6P9A3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms