Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC009053.1-202ENST00000563377 2051 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 SNORA73B-201ENST00000363217 204 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 RNA5SP260-201ENST00000363849 111 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC136624.1-201ENST00000400791 413 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 EEF1GP6-201ENST00000402309 905 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL021331.1-201ENST00000402817 582 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 RN7SKP148-201ENST00000410179 275 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC093422.3-201ENST00000428506 305 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC079807.1-201ENST00000429993 481 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 NANOGP2-201ENST00000435391 727 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 EEF1E1P1-201ENST00000446998 430 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC068491.1-201ENST00000449539 1241 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 ST13P21-201ENST00000453250 1098 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 RPL31P11-202ENST00000454082 372 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 OR2AF1P-201ENST00000454899 889 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC004890.1-201ENST00000461005 181 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC084754.1-201ENST00000463466 464 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC008379.1-201ENST00000463655 464 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 MARK2P8-201ENST00000476069 952 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 RN7SL502P-201ENST00000481857 290 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC069304.1-201ENST00000491593 704 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 RPL37P23-201ENST00000492641 294 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC067904.2-201ENST00000517322 1283 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 BTF3P1-201ENST00000522014 495 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 OR5M4P-201ENST00000529436 925 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 EIF5A2P1-201ENST00000564027 460 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 YWHAQP7-201ENST00000603536 658 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL358335.3-201ENST00000604678 327 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC090186.1-201ENST00000605991 572 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC006335.3-201ENST00000613408 292 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC009159.1-201ENST00000618386 642 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AP003400.2-201ENST00000624036 666 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL596275.2-203ENST00000641951 371 ntBASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RSPO4Q2I0M5 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RSPO4Q2I0M5 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms