Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 AC112243.1-201ENST00000623949 3851 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 RN7SKP191-201ENST00000364713 306 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.99□□□□□ -1.29
HDAC4P56524 RPS10P14-201ENST00000440748 502 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.99□□□□□ -1.29
HDAC4P56524 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC128716.1-201ENST00000475129 166 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 RPL7AP23-201ENST00000482625 776 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC093325.1-201ENST00000508378 326 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC091849.1-201ENST00000509920 121 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 AC021733.2-201ENST00000518830 497 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 PHBP2-201ENST00000532859 806 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 AL445383.1-201ENST00000554689 874 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 PPIAP14-201ENST00000577627 496 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.99□□□□□ -1.29
HDAC4P56524 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 AP003072.5-201ENST00000623872 773 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.99□□□□□ -1.29
HDAC4P56524 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.99□□□□□ -1.29
HDAC4P56524 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
HDAC4P56524 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
HDAC4P56524 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
HDAC4P56524 AL512353.3-201ENST00000417517 1326 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 SAMMSON-210ENST00000641260 1308 ntBASIC6.99□□□□□ -1.29
HDAC4P56524 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HDAC4P56524 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC4P56524 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HDAC4P56524 AC034229.2-201ENST00000566945 2508 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 AC009120.2-204ENST00000621548 2032 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC4P56524 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC4P56524 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 RNA5SP382-201ENST00000363355 112 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 AL359694.1-201ENST00000403247 604 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 AL136100.1-201ENST00000407696 330 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.98□□□□□ -1.29
HDAC4P56524 AHCYP8-201ENST00000425108 209 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.98□□□□□ -1.29
HDAC4P56524 E2F6P1-201ENST00000428850 745 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 RPL3P11-201ENST00000434028 1146 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.98□□□□□ -1.29
HDAC4P56524 E2F6P3-201ENST00000441743 743 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 AL121578.2-201ENST00000448797 447 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 RPL26P30-201ENST00000453533 435 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 RN7SL372P-201ENST00000461982 298 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 RN7SL655P-201ENST00000486087 298 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 OR52H2P-201ENST00000514607 902 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 AP002004.1-206ENST00000532441 876 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.98□□□□□ -1.29
HDAC4P56524 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.98□□□□□ -1.29
HDAC4P56524 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 AC106785.4-201ENST00000569492 412 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 RN7SL270P-201ENST00000579643 281 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 AC011921.2-201ENST00000589465 152 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.98□□□□□ -1.29
HDAC4P56524 RPS4XP21-201ENST00000603814 750 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 DIMT1P1-201ENST00000603970 763 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.98□□□□□ -1.29
HDAC4P56524 AC002044.3-201ENST00000623314 541 ntBASIC6.98□□□□□ -1.29
HDAC4P56524 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HDAC4P56524 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HDAC4P56524 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.98□□□□□ -1.29
HDAC4P56524 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.98□□□□□ -1.29
HDAC4P56524 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HDAC4P56524 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms