Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.21□□□□□ -1.26
VCPP55072 PPIAP6-201ENST00000557078 499 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC037479.1-201ENST00000558361 625 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 AC015818.6-201ENST00000584274 634 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.21□□□□□ -1.26
VCPP55072 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 AC008555.7-201ENST00000605008 583 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 AC005514.1-201ENST00000623521 208 ntBASIC7.21□□□□□ -1.26
VCPP55072 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.21□□□□□ -1.26
VCPP55072 MIR4302-201ENST00000638058 60 ntBASIC7.21□□□□□ -1.26
VCPP55072 AC119674.1-217ENST00000641942 1086 ntBASIC7.21□□□□□ -1.26
VCPP55072 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 AC007938.1-201ENST00000562524 2902 ntBASIC7.21□□□□□ -1.26
VCPP55072 Z93929.1-201ENST00000418200 1475 ntBASIC7.21□□□□□ -1.26
VCPP55072 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 AC009831.5-201ENST00000624000 3189 ntBASIC7.21□□□□□ -1.26
VCPP55072 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.21□□□□□ -1.26
VCPP55072 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VCPP55072 AC009135.2-201ENST00000624136 1768 ntBASIC7.2□□□□□ -1.26
VCPP55072 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.2□□□□□ -1.26
VCPP55072 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.2□□□□□ -1.26
VCPP55072 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.2□□□□□ -1.26
VCPP55072 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
VCPP55072 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
VCPP55072 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
VCPP55072 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
VCPP55072 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.2□□□□□ -1.26
VCPP55072 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
VCPP55072 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 AL451046.1-201ENST00000406097 534 ntBASIC7.2□□□□□ -1.26
VCPP55072 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.2□□□□□ -1.26
VCPP55072 DNAJA1P5-201ENST00000440278 943 ntBASIC7.2□□□□□ -1.26
VCPP55072 AL391987.1-201ENST00000441025 200 ntBASIC7.2□□□□□ -1.26
VCPP55072 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.2□□□□□ -1.26
VCPP55072 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.2□□□□□ -1.26
VCPP55072 NPM1P19-201ENST00000450070 712 ntBASIC7.2□□□□□ -1.26
VCPP55072 RN7SL390P-201ENST00000470634 284 ntBASIC7.2□□□□□ -1.26
VCPP55072 RPL7P51-201ENST00000490532 749 ntBASIC7.2□□□□□ -1.26
VCPP55072 AC253576.1-201ENST00000511645 1156 ntBASIC7.2□□□□□ -1.26
VCPP55072 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.2□□□□□ -1.26
VCPP55072 RPL29P33-201ENST00000587474 316 ntBASIC7.2□□□□□ -1.26
VCPP55072 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.2□□□□□ -1.26
VCPP55072 AC063977.7-201ENST00000594454 337 ntBASIC7.2□□□□□ -1.26
VCPP55072 AC073857.1-201ENST00000625082 1054 ntBASIC7.2□□□□□ -1.26
VCPP55072 TATDN2P3-201ENST00000452855 3665 ntBASIC7.2□□□□□ -1.26
VCPP55072 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.2□□□□□ -1.26
VCPP55072 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 OR52B5P-204ENST00000641744 3467 ntBASIC7.2□□□□□ -1.26
VCPP55072 AC102941.1-201ENST00000567616 1537 ntBASIC7.2□□□□□ -1.26
VCPP55072 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
VCPP55072 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
VCPP55072 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
VCPP55072 AC010132.4-201ENST00000569883 1368 ntBASIC7.2□□□□□ -1.26
VCPP55072 MAPK10-379ENST00000642013 1385 ntBASIC7.2□□□□□ -1.26
VCPP55072 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 AP000866.6-201ENST00000638898 3579 ntBASIC7.19□□□□□ -1.26
VCPP55072 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 VIM2P-201ENST00000402383 1294 ntBASIC7.19□□□□□ -1.26
VCPP55072 AL359715.1-201ENST00000404330 555 ntBASIC7.19□□□□□ -1.26
VCPP55072 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 AC069154.1-201ENST00000432914 542 ntBASIC7.19□□□□□ -1.26
VCPP55072 GAPDHP59-201ENST00000435908 267 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC110602.1-201ENST00000437414 318 ntBASIC7.19□□□□□ -1.26
VCPP55072 PMS2P9-201ENST00000441237 515 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 BZW1P1-201ENST00000454901 1240 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.19□□□□□ -1.26
VCPP55072 HMGN1P16-201ENST00000508308 283 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC096754.1-201ENST00000508904 818 ntBASIC7.19□□□□□ -1.26
VCPP55072 SNX18P25-201ENST00000510539 758 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.19□□□□□ -1.26
VCPP55072 MTCYBP44-201ENST00000514835 823 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC010442.1-201ENST00000515583 816 ntBASIC7.19□□□□□ -1.26
VCPP55072 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms