Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RN7SKP118-201ENST00000364331 330 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 RNA5SP140-201ENST00000364524 92 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AC117434.1-201ENST00000419971 836 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AL139415.1-201ENST00000424862 352 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AP003385.1-201ENST00000426387 893 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN9P43378 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN9P43378 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN9P43378 AC022730.1-201ENST00000473114 568 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AC068522.1-201ENST00000482895 345 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 RN7SL267P-201ENST00000485107 261 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.89□□□□□ -1.31
PTPN9P43378 SCARNA5-201ENST00000516201 276 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 RNU6-551P-201ENST00000516661 103 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.89□□□□□ -1.31
PTPN9P43378 AC005519.1-201ENST00000554490 601 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 CCDC58P1-201ENST00000578567 430 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 AL591222.2-201ENST00000604443 754 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 MIR6849-201ENST00000618543 69 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN9P43378 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN9P43378 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN9P43378 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.89□□□□□ -1.31
PTPN9P43378 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN9P43378 AP002370.1-201ENST00000528055 1602 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.89□□□□□ -1.31
PTPN9P43378 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN9P43378 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN9P43378 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
PTPN9P43378 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
PTPN9P43378 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN9P43378 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
PTPN9P43378 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTPN9P43378 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.89□□□□□ -1.31
PTPN9P43378 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.88□□□□□ -1.31
PTPN9P43378 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.88□□□□□ -1.31
PTPN9P43378 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
PTPN9P43378 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC004023.1-201ENST00000561473 1744 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 AC005034.3-201ENST00000604845 1747 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PTPN9P43378 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 PPIAP24-201ENST00000328558 471 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 AC092634.1-201ENST00000366505 199 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 AC244033.1-201ENST00000426826 870 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 HMGN1P32-201ENST00000441744 256 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 AC236972.4-201ENST00000458091 963 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.88□□□□□ -1.31
PTPN9P43378 RPL5P33-201ENST00000487833 905 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC093325.1-201ENST00000508378 326 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC008429.2-201ENST00000523057 864 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 OR4C49P-201ENST00000563891 900 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.88□□□□□ -1.31
PTPN9P43378 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 RPL29P33-201ENST00000587474 316 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 U91328.4-201ENST00000608919 517 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
PTPN9P43378 AL118556.2-201ENST00000614375 824 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 AC073488.9-201ENST00000631601 754 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PTPN9P43378 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
PTPN9P43378 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 PARP4P1-201ENST00000435945 2337 ntBASIC6.88□□□□□ -1.31
PTPN9P43378 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN9P43378 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms