Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CDY5P-201ENST00000411487 1580 ntBASIC6.94□□□□□ -1.3
APOEP02649 CDY9P-201ENST00000451397 1580 ntBASIC6.94□□□□□ -1.3
APOEP02649 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
APOEP02649 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.94□□□□□ -1.3
APOEP02649 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
APOEP02649 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.94□□□□□ -1.3
APOEP02649 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
APOEP02649 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.94□□□□□ -1.3
APOEP02649 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 RBPJP6-201ENST00000411556 1431 ntBASIC6.93□□□□□ -1.3
APOEP02649 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.93□□□□□ -1.3
APOEP02649 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.93□□□□□ -1.3
APOEP02649 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
APOEP02649 RN7SKP184-201ENST00000362348 333 ntBASIC6.93□□□□□ -1.3
APOEP02649 RNA5SP308-201ENST00000362532 115 ntBASIC6.93□□□□□ -1.3
APOEP02649 AL049697.3-201ENST00000406493 982 ntBASIC6.93□□□□□ -1.3
APOEP02649 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.93□□□□□ -1.3
APOEP02649 UBBP5-201ENST00000446970 266 ntBASIC6.93□□□□□ -1.3
APOEP02649 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.93□□□□□ -1.3
APOEP02649 AC133965.1-201ENST00000452984 354 ntBASIC6.93□□□□□ -1.3
APOEP02649 CEACAMP11-201ENST00000455211 583 ntBASIC6.93□□□□□ -1.3
APOEP02649 RN7SL83P-201ENST00000468131 297 ntBASIC6.93□□□□□ -1.3
APOEP02649 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.93□□□□□ -1.3
APOEP02649 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.93□□□□□ -1.3
APOEP02649 AC073581.1-201ENST00000519036 575 ntBASIC6.93□□□□□ -1.3
APOEP02649 AP004607.6-201ENST00000525033 1202 ntBASIC6.93□□□□□ -1.3
APOEP02649 AC027667.1-201ENST00000545814 304 ntBASIC6.93□□□□□ -1.3
APOEP02649 AC005519.1-201ENST00000554490 601 ntBASIC6.93□□□□□ -1.3
APOEP02649 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.93□□□□□ -1.3
APOEP02649 PPIAP14-201ENST00000577627 496 ntBASIC6.93□□□□□ -1.3
APOEP02649 AC011921.2-201ENST00000589465 152 ntBASIC6.93□□□□□ -1.3
APOEP02649 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.93□□□□□ -1.3
APOEP02649 AL390877.1-201ENST00000605704 214 ntBASIC6.93□□□□□ -1.3
APOEP02649 AL445647.2-201ENST00000615170 130 ntBASIC6.93□□□□□ -1.3
APOEP02649 AL354718.1-201ENST00000619764 589 ntBASIC6.93□□□□□ -1.3
APOEP02649 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 PSMC1P4-201ENST00000515236 1327 ntBASIC6.93□□□□□ -1.3
APOEP02649 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
APOEP02649 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.93□□□□□ -1.3
APOEP02649 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
APOEP02649 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.92□□□□□ -1.3
APOEP02649 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.92□□□□□ -1.3
APOEP02649 EIF3EP2-201ENST00000423042 1814 ntBASIC6.92□□□□□ -1.3
APOEP02649 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
APOEP02649 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.92□□□□□ -1.3
APOEP02649 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.92□□□□□ -1.3
APOEP02649 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.92□□□□□ -1.3
APOEP02649 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.92□□□□□ -1.3
APOEP02649 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.92□□□□□ -1.3
APOEP02649 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.92□□□□□ -1.3
APOEP02649 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.92□□□□□ -1.3
APOEP02649 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.92□□□□□ -1.3
APOEP02649 AL445991.1-201ENST00000450381 475 ntBASIC6.92□□□□□ -1.3
APOEP02649 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 RN7SL561P-201ENST00000488553 281 ntBASIC6.92□□□□□ -1.3
APOEP02649 MRPL57P6-201ENST00000506570 309 ntBASIC6.92□□□□□ -1.3
APOEP02649 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.92□□□□□ -1.3
APOEP02649 OR52H2P-201ENST00000514607 902 ntBASIC6.92□□□□□ -1.3
APOEP02649 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.92□□□□□ -1.3
APOEP02649 RN7SKP64-201ENST00000517206 328 ntBASIC6.92□□□□□ -1.3
APOEP02649 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.92□□□□□ -1.3
APOEP02649 AC106785.4-201ENST00000569492 412 ntBASIC6.92□□□□□ -1.3
APOEP02649 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.92□□□□□ -1.3
APOEP02649 AC005479.3-201ENST00000602790 431 ntBASIC6.92□□□□□ -1.3
APOEP02649 AC211486.4-201ENST00000621495 113 ntBASIC6.92□□□□□ -1.3
APOEP02649 RAB28P4-201ENST00000622233 665 ntBASIC6.92□□□□□ -1.3
APOEP02649 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.92□□□□□ -1.3
APOEP02649 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.92□□□□□ -1.3
APOEP02649 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.92□□□□□ -1.3
APOEP02649 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
APOEP02649 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
APOEP02649 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms