Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.04□□□□□ -1.44
SPTA1P02549 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.04□□□□□ -1.44
SPTA1P02549 MIR4489-201ENST00000578869 62 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 AC137695.2-201ENST00000603123 754 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 AC024884.1-201ENST00000620583 399 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 CR383656.5-201ENST00000547616 1340 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 RNF19BPY-201ENST00000458209 1550 ntBASIC6.04□□□□□ -1.44
SPTA1P02549 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SPTA1P02549 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.03□□□□□ -1.44
SPTA1P02549 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.03□□□□□ -1.44
SPTA1P02549 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SPTA1P02549 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SPTA1P02549 RN7SKP160-201ENST00000363804 340 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 RN7SKP292-201ENST00000365522 317 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 MIR130B-202ENST00000385018 82 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.03□□□□□ -1.44
SPTA1P02549 RPS7P12-201ENST00000422385 582 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 PTMAP6-201ENST00000439110 327 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AL136038.1-201ENST00000497246 351 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.03□□□□□ -1.44
SPTA1P02549 AL671862.1-201ENST00000515851 349 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AC020937.1-201ENST00000519677 1013 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AC084337.1-201ENST00000524809 686 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.03□□□□□ -1.44
SPTA1P02549 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.03□□□□□ -1.44
SPTA1P02549 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.03□□□□□ -1.44
SPTA1P02549 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.03□□□□□ -1.44
SPTA1P02549 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.03□□□□□ -1.44
SPTA1P02549 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
SPTA1P02549 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 MRPS6P2-201ENST00000381143 370 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 EEF1B2P8-201ENST00000414101 671 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 FTH1P20-201ENST00000434913 548 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.03□□□□□ -1.44
SPTA1P02549 AL645937.3-201ENST00000453647 936 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 RPL12P30-201ENST00000488389 499 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AC063943.2-201ENST00000495697 534 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SPTA1P02549 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SPTA1P02549 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.03□□□□□ -1.44
SPTA1P02549 AC018992.1-201ENST00000523778 2149 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.03□□□□□ -1.44
SPTA1P02549 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.03□□□□□ -1.44
SPTA1P02549 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.03□□□□□ -1.44
SPTA1P02549 AL161729.2-201ENST00000605700 456 ntBASIC6.03□□□□□ -1.44
SPTA1P02549 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.44
SPTA1P02549 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.02□□□□□ -1.45
SPTA1P02549 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 AC132219.2-201ENST00000624416 2327 ntBASIC6.02□□□□□ -1.45
SPTA1P02549 RNA5SP273-201ENST00000362484 113 ntBASIC6.02□□□□□ -1.45
SPTA1P02549 AC103563.5-201ENST00000455643 364 ntBASIC6.02□□□□□ -1.45
SPTA1P02549 AC009963.3-201ENST00000458090 486 ntBASIC6.02□□□□□ -1.45
SPTA1P02549 RN7SL216P-201ENST00000471607 298 ntBASIC6.02□□□□□ -1.45
SPTA1P02549 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.02□□□□□ -1.45
SPTA1P02549 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.02□□□□□ -1.45
SPTA1P02549 AC020916.2-201ENST00000591242 360 ntBASIC6.02□□□□□ -1.45
SPTA1P02549 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC6.02□□□□□ -1.45
SPTA1P02549 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.02□□□□□ -1.45
SPTA1P02549 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 AC090771.1-201ENST00000585803 1618 ntBASIC6.02□□□□□ -1.45
SPTA1P02549 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.02□□□□□ -1.45
SPTA1P02549 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SPTA1P02549 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SPTA1P02549 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms