Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.89□□□□□ -1.47
COPS3Q9UNS2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.89□□□□□ -1.47
COPS3Q9UNS2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC015799.1-201ENST00000622996 3122 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ZNF806-201ENST00000438300 1774 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RN7SKP118-201ENST00000364331 330 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RN7SKP186-201ENST00000365371 303 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RNU2-5P-201ENST00000410533 180 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RN7SKP137-201ENST00000411074 307 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 CLCN3P1-201ENST00000423965 1017 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC097721.1-201ENST00000427150 1253 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 BMP6P1-201ENST00000431230 679 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RPL6P24-201ENST00000445338 864 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 RPL23AP64-201ENST00000469465 435 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AL135933.1-201ENST00000498657 802 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AL132640.1-201ENST00000559594 619 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 MIR4685-201ENST00000578185 69 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC125494.2-201ENST00000602431 657 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AL034374.2-201ENST00000605281 548 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 NEK2P2-201ENST00000438441 1338 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.88□□□□□ -1.47
COPS3Q9UNS2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPS3Q9UNS2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 GTF2IP4-201ENST00000453092 2054 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 RNU12-2P-201ENST00000364789 156 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 RN7SKP1-201ENST00000365525 307 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 RNA5SP474-201ENST00000391234 90 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 PDCL3P5-201ENST00000398028 722 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 FTH1P26-201ENST00000406512 701 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 AL359633.1-201ENST00000421403 310 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 RPS7P12-201ENST00000422385 582 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 AC114402.2-201ENST00000432760 643 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 AC009518.3-201ENST00000438972 253 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 RPL7AP71-201ENST00000451120 739 ntBASIC5.87□□□□□ -1.47
COPS3Q9UNS2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.87□□□□□ -1.47
COPS3Q9UNS2 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms