Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RIMBP3Q9UFD9 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 CEACAMP9-201ENST00000442990 513 ntBASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AL049840.6-201ENST00000604583 345 ntBASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AC119674.1-201ENST00000641611 1210 ntBASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AL353807.3-201ENST00000500626 2505 ntBASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 AC122713.2-201ENST00000624942 3335 ntBASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
RIMBP3Q9UFD9 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 AL590762.1-201ENST00000391782 432 ntBASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 CYB5AP4-201ENST00000396692 399 ntBASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 AC092905.1-201ENST00000467527 949 ntBASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 BUB1P1-201ENST00000603541 607 ntBASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 MTCO1P25-201ENST00000414449 1799 ntBASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 AC131971.1-201ENST00000332881 1482 ntBASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
RIMBP3Q9UFD9 SPATA31D5P-201ENST00000376459 4784 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 CYP4Z2P-201ENST00000423332 1512 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AL049634.1-201ENST00000453770 1720 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 RPL35AP19-201ENST00000469425 329 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 RN7SL97P-201ENST00000486780 299 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 RPS4XP23-201ENST00000487801 237 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AC110775.1-201ENST00000513721 462 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 MRPL57P1-201ENST00000621486 265 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AC091953.3-201ENST00000623220 236 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 AC136428.4-201ENST00000634254 1155 ntBASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
RIMBP3Q9UFD9 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 RPL35AP31-201ENST00000418340 337 ntBASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 AC005033.1-201ENST00000428904 813 ntBASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 TRIM60P16-201ENST00000444048 694 ntBASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC9.95□□□□□ -0.82
RIMBP3Q9UFD9 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms