Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC023141.1-201ENST00000419418 379 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 PPIL1P1-201ENST00000423936 499 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 PRPS1P2-201ENST00000430496 937 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 RN7SL849P-201ENST00000485236 295 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 MTCYBP44-201ENST00000514835 823 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC097486.1-201ENST00000515331 210 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AL589765.5-201ENST00000596133 515 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC092960.1-201ENST00000604762 351 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 AC016590.3-201ENST00000611171 753 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 RNA5SP439-201ENST00000617595 124 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 CAP1P2-201ENST00000417455 1409 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 MIR133A2-201ENST00000347538 102 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 RN7SKP236-201ENST00000410635 284 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 RNA5SP280-201ENST00000411230 115 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AL357632.1-201ENST00000426688 643 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC090954.1-201ENST00000445502 361 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 VN1R38P-201ENST00000450265 887 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AL096803.1-201ENST00000456921 1021 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC236972.4-201ENST00000458091 963 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 SNX18P26-201ENST00000458433 740 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 RN7SL647P-201ENST00000485429 300 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 SSU72P6-201ENST00000532644 488 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC093524.1-201ENST00000564266 1094 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC091304.4-201ENST00000565703 620 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AL049840.5-201ENST00000602827 552 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC008626.2-201ENST00000624425 248 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AL353763.1-201ENST00000624467 1628 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 AC004014.2-201ENST00000623718 5122 ntBASIC6.38□□□□□ -1.39
CCDC28BQ9BUN5 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AL157831.2-201ENST00000564681 3095 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC024651.2-201ENST00000562480 2098 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 U3.14-201ENST00000365363 227 ntBASIC6.37□□□□□ -1.39
CCDC28BQ9BUN5 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms