Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 RNA5SP238-201ENST00000365464 120 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 NUDT19P3-201ENST00000404698 555 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 PRELID1P2-201ENST00000407805 396 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL662791.3-201ENST00000413771 776 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL606495.1-201ENST00000422100 813 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 NPM1P25-201ENST00000429734 854 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC090018.1-201ENST00000434369 367 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC244505.2-201ENST00000435089 759 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC245047.5-201ENST00000437312 556 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 MTATP6P13-201ENST00000438531 667 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL354872.1-201ENST00000456361 967 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL390026.1-201ENST00000456647 457 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC013787.1-201ENST00000460165 307 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC022730.1-201ENST00000473114 568 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC079594.1-201ENST00000489757 331 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC134050.1-201ENST00000495088 933 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 NPY6R-201ENST00000503807 1112 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC119751.1-201ENST00000513357 765 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 MTATP6P1-201ENST00000514057 681 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 SNORA3.4-201ENST00000515969 96 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 OR7E128P-201ENST00000532736 1024 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 PDCL3P1-201ENST00000534575 734 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 CYB5AP5-201ENST00000549779 389 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC092868.3-201ENST00000560515 784 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 RN7SL14P-201ENST00000579715 298 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 FCGR1CP-201ENST00000579737 1127 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 ZNF415P1-201ENST00000582279 1166 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 OR7E19P-202ENST00000589942 844 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 CCDC58P3-201ENST00000590792 430 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 SIGLEC31P-201ENST00000594237 551 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC025449.1-201ENST00000603896 529 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 OR2AS2P-201ENST00000606902 342 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL136985.2-201ENST00000607372 535 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 uc_338.21-201ENST00000622458 147 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC006453.3-201ENST00000635891 377 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 ZNF542P-204ENST00000482727 1305 ntBASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHKBP1Q8TBC3 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 AC093844.1-201ENST00000514910 1361 ntBASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 RNU6-152P-201ENST00000384037 107 ntBASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 RPS3AP5-201ENST00000389400 821 ntBASIC7.75□□□□□ -1.17
SHKBP1Q8TBC3 MTCO3P41-201ENST00000414801 328 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms