Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC087897.1-201ENST00000550134 156 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 MIR4789-201ENST00000577469 82 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 WDR45BP1-201ENST00000583470 1029 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 BMS1P7-201ENST00000602440 1052 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC016394.1-201ENST00000608444 833 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 VIS1.1-201ENST00000610517 203 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 HULC.1-201ENST00000612720 240 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC005609.2-201ENST00000623320 592 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC079298.1-201ENST00000625026 1619 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AL356317.1-201ENST00000396110 1436 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 MARK2P10-201ENST00000454959 1437 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AL031651.1-201ENST00000615357 1438 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC068860.1-201ENST00000623701 3736 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC092821.3-202ENST00000641304 2767 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 AC132825.1-201ENST00000463573 2247 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 CCDC150P1-201ENST00000537123 2215 ntBASIC7.58□□□□□ -1.2
PHC3Q8NDX5 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
PHC3Q8NDX5 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL132640.2-201ENST00000559968 1698 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RNU4-92P-201ENST00000363783 136 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL353151.1-201ENST00000402406 604 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL109918.1-202ENST00000406724 436 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 XKRYP4-201ENST00000414395 483 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 GYG1P2-201ENST00000426437 1006 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL512882.1-201ENST00000436086 832 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL008629.1-201ENST00000438615 184 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC002553.1-201ENST00000442828 802 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 XKRYP5-201ENST00000449659 483 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 NPM1P19-201ENST00000450070 712 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 KIF3AP1-201ENST00000454055 611 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RPS6P2-201ENST00000454208 705 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RN7SL861P-201ENST00000473793 285 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RPS27AP16-201ENST00000492222 470 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RN7SL124P-201ENST00000498656 285 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC021146.7-201ENST00000509604 775 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 BTG1P1-201ENST00000540396 508 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 OR11J5P-201ENST00000556889 934 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms