Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC112492.2-201ENST00000432774 1030 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 LINC01985-201ENST00000450746 436 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 RPL23AP35-201ENST00000451906 501 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 GAPDHP45-201ENST00000452090 349 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC073522.1-201ENST00000483312 377 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 RN7SL62P-201ENST00000498506 297 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC108073.1-201ENST00000508231 674 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 KRT19P6-201ENST00000510983 209 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 CYP4F27P-201ENST00000514557 494 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 RPL23AP96-201ENST00000514593 591 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 FTH1-207ENST00000532601 742 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 NTAN1P3-201ENST00000535885 715 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 RN7SL804P-201ENST00000582466 298 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 MIR6892-201ENST00000612346 115 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC090970.3-201ENST00000612566 866 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 GLTP-206ENST00000617457 969 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC012414.7-202ENST00000622705 1090 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC245100.4-207ENST00000640776 1082 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 LINC01739-205ENST00000641890 573 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC006058.1-201ENST00000568686 5067 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AL080317.3-201ENST00000607434 4315 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 HYDIN2-203ENST00000614586 13885 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 MTND4P29-201ENST00000503122 1372 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ICE2P1-201ENST00000512800 1849 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 LYARP1-201ENST00000436977 1501 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 NF1P7-201ENST00000612076 1530 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 TMSB4XP2-201ENST00000335179 210 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 OR51D1-201ENST00000357605 1124 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 Y_RNA.11-201ENST00000362375 109 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 RNU6-348P-201ENST00000384386 107 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 MIR181A1-201ENST00000385026 110 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 FANCL-204ENST00000403676 849 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 RNU6-77P-201ENST00000410554 91 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL589763.1-201ENST00000412257 791 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 FTH1P16-201ENST00000435241 552 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AP002383.1-201ENST00000439405 720 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL136454.1-201ENST00000443181 466 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ARL5AP2-201ENST00000444698 533 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL389885.1-201ENST00000447227 384 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AC025062.1-201ENST00000465163 644 ntBASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.85□□□□□ -1.15
DEPDC4Q8N2C3 AP001318.1-201ENST00000476981 321 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms