Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DUTP4-201ENST00000424782 475 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 FTH1P10-202ENST00000430907 550 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 HNRNPA1P18-201ENST00000433537 927 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC092824.1-201ENST00000483524 576 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC124945.1-201ENST00000485133 188 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 PSMA2P2-201ENST00000504319 686 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 RNA5SP271-201ENST00000516700 88 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC009237.12-201ENST00000604755 742 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC116631.1-202ENST00000640984 683 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC007993.1-201ENST00000621298 2430 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AL353662.1-201ENST00000439099 327 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC090958.1-201ENST00000511122 351 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC106800.3-201ENST00000511389 308 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 AC084337.1-201ENST00000524809 686 ntBASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CDC42BPAQ5VT25 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 SNORA43.1-201ENST00000364863 140 ntBASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 LYPLA1P1-201ENST00000434514 622 ntBASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 SUMO2P3-201ENST00000438311 288 ntBASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 PPIAP10-201ENST00000438675 458 ntBASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 GAPDHP23-201ENST00000444823 993 ntBASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 AL161636.2-201ENST00000445179 927 ntBASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CDC42BPAQ5VT25 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 NPM1P19-201ENST00000450070 712 ntBASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 Y_RNA.710-201ENST00000516975 110 ntBASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 AC015818.6-201ENST00000584274 634 ntBASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 MIR4443-201ENST00000585052 53 ntBASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 RPL12P48-201ENST00000605620 304 ntBASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC9.54□□□□□ -0.88
CDC42BPAQ5VT25 OR11H13P-201ENST00000359695 979 ntBASIC9.53□□□□□ -0.88
CDC42BPAQ5VT25 RNU1-134P-201ENST00000362935 165 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms