Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.92□□□□□ -1.46
H3F3AP84243 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.92□□□□□ -1.46
H3F3AP84243 AC025171.4-201ENST00000607250 1047 ntBASIC5.92□□□□□ -1.46
H3F3AP84243 AC093635.1-201ENST00000609028 555 ntBASIC5.92□□□□□ -1.46
H3F3AP84243 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
H3F3AP84243 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.92□□□□□ -1.46
H3F3AP84243 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.92□□□□□ -1.46
H3F3AP84243 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.92□□□□□ -1.46
H3F3AP84243 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
H3F3AP84243 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
H3F3AP84243 ZNF658B-201ENST00000602828 3408 ntBASIC5.92□□□□□ -1.46
H3F3AP84243 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
H3F3AP84243 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
H3F3AP84243 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
H3F3AP84243 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.92□□□□□ -1.46
H3F3AP84243 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.92□□□□□ -1.46
H3F3AP84243 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3F3AP84243 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
H3F3AP84243 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
H3F3AP84243 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
H3F3AP84243 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.92□□□□□ -1.46
H3F3AP84243 AC007406.5-201ENST00000570140 3170 ntBASIC5.92□□□□□ -1.46
H3F3AP84243 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.91□□□□□ -1.46
H3F3AP84243 SNX18P3-202ENST00000565670 1750 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.91□□□□□ -1.46
H3F3AP84243 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 AC079248.1-201ENST00000427568 1546 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H3F3AP84243 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H3F3AP84243 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H3F3AP84243 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
H3F3AP84243 FUNDC2P3-201ENST00000334716 533 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
H3F3AP84243 RNA5SP308-201ENST00000362532 115 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 MRPS6P2-201ENST00000381143 370 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 RPL12P23-201ENST00000405880 490 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 RN7SKP188-201ENST00000410789 317 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AC017035.1-201ENST00000411999 1115 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 CYCSP52-201ENST00000422857 310 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AL596268.1-201ENST00000427910 1048 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 WDR82P2-201ENST00000444540 928 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 TVP23CP1-201ENST00000450317 639 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.91□□□□□ -1.46
H3F3AP84243 RPS4XP17-201ENST00000479057 754 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.91□□□□□ -1.46
H3F3AP84243 SCARNA5-201ENST00000516201 276 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.91□□□□□ -1.46
H3F3AP84243 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.91□□□□□ -1.46
H3F3AP84243 AC026956.1-201ENST00000558741 396 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.91□□□□□ -1.46
H3F3AP84243 AC027796.1-201ENST00000575593 512 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.91□□□□□ -1.46
H3F3AP84243 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.91□□□□□ -1.46
H3F3AP84243 AL356986.1-201ENST00000604085 341 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AL157899.1-201ENST00000604110 936 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AC114477.1-201ENST00000605097 605 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.91□□□□□ -1.46
H3F3AP84243 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 AL136531.3-201ENST00000624378 3658 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AC022613.3-201ENST00000560740 1346 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.91□□□□□ -1.46
H3F3AP84243 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.91□□□□□ -1.46
H3F3AP84243 AC062022.1-201ENST00000451026 1684 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
H3F3AP84243 FANCD2P2-201ENST00000437591 1400 ntBASIC5.91□□□□□ -1.46
H3F3AP84243 AC087392.3-202ENST00000358446 1754 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3F3AP84243 AC089998.1-201ENST00000548575 3141 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.9□□□□□ -1.46
H3F3AP84243 API5P1-201ENST00000424316 1510 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
H3F3AP84243 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC5.9□□□□□ -1.46
H3F3AP84243 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
H3F3AP84243 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H3F3AP84243 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H3F3AP84243 UGT2B27P-201ENST00000505092 1620 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.9□□□□□ -1.46
H3F3AP84243 MIR1266-201ENST00000408125 84 ntBASIC5.9□□□□□ -1.46
H3F3AP84243 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.9□□□□□ -1.46
H3F3AP84243 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.9□□□□□ -1.46
H3F3AP84243 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
H3F3AP84243 AL589794.1-201ENST00000424971 390 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms