Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 MTND4P25-201ENST00000441039 533 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.06□□□□□ -1.28
YBX1P67809 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC7.06□□□□□ -1.28
YBX1P67809 AL353803.3-201ENST00000444641 335 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AGKP1-201ENST00000455254 1263 ntBASIC7.06□□□□□ -1.28
YBX1P67809 RN7SL145P-201ENST00000469955 296 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AC126121.1-201ENST00000482313 553 ntBASIC7.06□□□□□ -1.28
YBX1P67809 CEACAMP3-202ENST00000483806 638 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.06□□□□□ -1.28
YBX1P67809 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 AC010625.1-201ENST00000511296 403 ntBASIC7.06□□□□□ -1.28
YBX1P67809 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
YBX1P67809 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.06□□□□□ -1.28
YBX1P67809 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.06□□□□□ -1.28
YBX1P67809 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.06□□□□□ -1.28
YBX1P67809 IGLVI-42-201ENST00000522485 381 ntBASIC7.06□□□□□ -1.28
YBX1P67809 OR10V3P-201ENST00000525712 725 ntBASIC7.06□□□□□ -1.28
YBX1P67809 HNRNPCP8-201ENST00000528764 888 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AP006587.5-201ENST00000532033 739 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AC018523.1-201ENST00000534211 512 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.06□□□□□ -1.28
YBX1P67809 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.06□□□□□ -1.28
YBX1P67809 AC009094.1-201ENST00000564443 426 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.06□□□□□ -1.28
YBX1P67809 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.06□□□□□ -1.28
YBX1P67809 MRPS35P3-201ENST00000603189 709 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AL353807.4-201ENST00000604995 257 ntBASIC7.06□□□□□ -1.28
YBX1P67809 RN7SL778P-201ENST00000607160 297 ntBASIC7.06□□□□□ -1.28
YBX1P67809 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.06□□□□□ -1.28
YBX1P67809 MIR6774-201ENST00000614651 70 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AP002782.1-201ENST00000623107 614 ntBASIC7.06□□□□□ -1.28
YBX1P67809 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.06□□□□□ -1.28
YBX1P67809 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.06□□□□□ -1.28
YBX1P67809 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
YBX1P67809 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
YBX1P67809 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 AL157713.1-201ENST00000379752 1531 ntBASIC7.06□□□□□ -1.28
YBX1P67809 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
YBX1P67809 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.06□□□□□ -1.28
YBX1P67809 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
YBX1P67809 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
YBX1P67809 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.06□□□□□ -1.28
YBX1P67809 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.05□□□□□ -1.28
YBX1P67809 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 CR382285.2-201ENST00000624662 1495 ntBASIC7.05□□□□□ -1.28
YBX1P67809 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 AC062029.1-202ENST00000606164 3651 ntBASIC7.05□□□□□ -1.28
YBX1P67809 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
YBX1P67809 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
YBX1P67809 PPIAP22-201ENST00000358455 498 ntBASIC7.05□□□□□ -1.28
YBX1P67809 SNORD116-9-201ENST00000384000 95 ntBASIC7.05□□□□□ -1.28
YBX1P67809 SNORD116-3-201ENST00000384287 95 ntBASIC7.05□□□□□ -1.28
YBX1P67809 SNORD116-7-201ENST00000384404 95 ntBASIC7.05□□□□□ -1.28
YBX1P67809 SNORD116-5-201ENST00000384462 95 ntBASIC7.05□□□□□ -1.28
YBX1P67809 RPL5P19-201ENST00000404228 893 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AMZ2P2-201ENST00000406819 1057 ntBASIC7.05□□□□□ -1.28
YBX1P67809 RN7SKP97-201ENST00000410966 333 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 BTF3L4P1-201ENST00000413813 468 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.05□□□□□ -1.28
YBX1P67809 TIMM9P2-201ENST00000419324 266 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 AL390840.1-201ENST00000420303 988 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 ZNF965P-201ENST00000432501 817 ntBASIC7.05□□□□□ -1.28
YBX1P67809 PTP4A1P3-201ENST00000433661 420 ntBASIC7.05□□□□□ -1.28
YBX1P67809 MTCYBP29-201ENST00000436327 1006 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AL353706.1-201ENST00000436728 494 ntBASIC7.05□□□□□ -1.28
YBX1P67809 NPM1P23-201ENST00000440193 849 ntBASIC7.05□□□□□ -1.28
YBX1P67809 RPL7P33-201ENST00000444159 742 ntBASIC7.05□□□□□ -1.28
YBX1P67809 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.05□□□□□ -1.28
YBX1P67809 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.05□□□□□ -1.28
YBX1P67809 RPL5P15-201ENST00000475870 897 ntBASIC7.05□□□□□ -1.28
YBX1P67809 OR9N1P-201ENST00000491296 333 ntBASIC7.05□□□□□ -1.28
YBX1P67809 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.05□□□□□ -1.28
YBX1P67809 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.05□□□□□ -1.28
YBX1P67809 OR7E163P-201ENST00000505943 894 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.05□□□□□ -1.28
YBX1P67809 AC016559.1-201ENST00000511420 199 ntBASIC7.05□□□□□ -1.28
YBX1P67809 AC103833.1-201ENST00000517442 172 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms