Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CDH6P55285 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 AL359092.1-201ENST00000417156 265 ntBASIC6.81□□□□□ -1.32
CDH6P55285 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 AL596268.1-201ENST00000427910 1048 ntBASIC6.81□□□□□ -1.32
CDH6P55285 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.81□□□□□ -1.32
CDH6P55285 UBBP5-201ENST00000446970 266 ntBASIC6.81□□□□□ -1.32
CDH6P55285 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.81□□□□□ -1.32
CDH6P55285 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.81□□□□□ -1.32
CDH6P55285 RPSAP24-201ENST00000461543 873 ntBASIC6.81□□□□□ -1.32
CDH6P55285 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.81□□□□□ -1.32
CDH6P55285 RPS3AP49-201ENST00000472161 790 ntBASIC6.81□□□□□ -1.32
CDH6P55285 RN7SL267P-201ENST00000485107 261 ntBASIC6.81□□□□□ -1.32
CDH6P55285 MTCO1P55-201ENST00000489829 745 ntBASIC6.81□□□□□ -1.32
CDH6P55285 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.81□□□□□ -1.32
CDH6P55285 MINOS1P4-201ENST00000515470 318 ntBASIC6.81□□□□□ -1.32
CDH6P55285 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.81□□□□□ -1.32
CDH6P55285 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.81□□□□□ -1.32
CDH6P55285 PPIAP14-201ENST00000577627 496 ntBASIC6.81□□□□□ -1.32
CDH6P55285 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 AL078623.1-201ENST00000602702 907 ntBASIC6.81□□□□□ -1.32
CDH6P55285 SNORD96A-201ENST00000606577 79 ntBASIC6.81□□□□□ -1.32
CDH6P55285 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
CDH6P55285 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 AL731556.1-201ENST00000394628 3711 ntBASIC6.81□□□□□ -1.32
CDH6P55285 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
CDH6P55285 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CDH6P55285 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH6P55285 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH6P55285 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CDH6P55285 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 AP000866.6-201ENST00000638898 3579 ntBASIC6.8□□□□□ -1.32
CDH6P55285 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 AC019178.1-201ENST00000392337 440 ntBASIC6.8□□□□□ -1.32
CDH6P55285 FDPSP5-201ENST00000399474 1057 ntBASIC6.8□□□□□ -1.32
CDH6P55285 RPL6P21-201ENST00000418672 846 ntBASIC6.8□□□□□ -1.32
CDH6P55285 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH6P55285 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 MGAT2P1-201ENST00000449718 797 ntBASIC6.8□□□□□ -1.32
CDH6P55285 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CDH6P55285 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 RN7SL655P-201ENST00000486087 298 ntBASIC6.8□□□□□ -1.32
CDH6P55285 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.8□□□□□ -1.32
CDH6P55285 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH6P55285 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH6P55285 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CDH6P55285 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH6P55285 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.8□□□□□ -1.32
CDH6P55285 AC007671.1-201ENST00000616957 830 ntBASIC6.8□□□□□ -1.32
CDH6P55285 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 AC012254.5-201ENST00000623573 478 ntBASIC6.8□□□□□ -1.32
CDH6P55285 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH6P55285 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH6P55285 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH6P55285 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH6P55285 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH6P55285 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 NEK2P2-201ENST00000438441 1338 ntBASIC6.79□□□□□ -1.32
CDH6P55285 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH6P55285 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH6P55285 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CDH6P55285 AC004023.1-201ENST00000561473 1744 ntBASIC6.79□□□□□ -1.32
CDH6P55285 RBPJP6-201ENST00000411556 1431 ntBASIC6.79□□□□□ -1.32
CDH6P55285 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms