Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 AL359263.1-201ENST00000441188 2796 ntBASIC7.11□□□□□ -1.27
NEK3P51956 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.11□□□□□ -1.27
NEK3P51956 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.11□□□□□ -1.27
NEK3P51956 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC7.11□□□□□ -1.27
NEK3P51956 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
NEK3P51956 AMZ2P2-201ENST00000406819 1057 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 EEF1B2P8-201ENST00000414101 671 ntBASIC7.11□□□□□ -1.27
NEK3P51956 MTND2P11-201ENST00000423638 648 ntBASIC7.11□□□□□ -1.27
NEK3P51956 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 DUTP4-201ENST00000424782 475 ntBASIC7.11□□□□□ -1.27
NEK3P51956 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 CHCHD4P5-201ENST00000436684 427 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AL604028.2-201ENST00000437848 788 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AC017099.1-201ENST00000448261 1028 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AC135721.2-201ENST00000464237 300 ntBASIC7.11□□□□□ -1.27
NEK3P51956 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 AC068522.1-201ENST00000482895 345 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.11□□□□□ -1.27
NEK3P51956 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 AC026458.1-201ENST00000564330 438 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AC015818.6-201ENST00000584274 634 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.11□□□□□ -1.27
NEK3P51956 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 RPS27AP19-201ENST00000597285 458 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AL023583.1-201ENST00000607518 1143 ntBASIC7.11□□□□□ -1.27
NEK3P51956 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.11□□□□□ -1.27
NEK3P51956 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 AL163152.1-201ENST00000642001 374 ntBASIC7.11□□□□□ -1.27
NEK3P51956 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.11□□□□□ -1.27
NEK3P51956 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.11□□□□□ -1.27
NEK3P51956 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NEK3P51956 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 AC092111.2-201ENST00000611627 1414 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC009135.2-201ENST00000624136 1768 ntBASIC7.1□□□□□ -1.27
NEK3P51956 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 HSPD1P1-201ENST00000503199 1726 ntBASIC7.1□□□□□ -1.27
NEK3P51956 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.1□□□□□ -1.27
NEK3P51956 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.1□□□□□ -1.27
NEK3P51956 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NEK3P51956 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NEK3P51956 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NEK3P51956 RNU6-1017P-201ENST00000363613 106 ntBASIC7.1□□□□□ -1.27
NEK3P51956 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 MIR99A-201ENST00000384906 81 ntBASIC7.1□□□□□ -1.27
NEK3P51956 RNU11-6P-201ENST00000391127 133 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.1□□□□□ -1.27
NEK3P51956 CHCHD3P1-201ENST00000425516 676 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.1□□□□□ -1.27
NEK3P51956 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.1□□□□□ -1.27
NEK3P51956 AC105918.1-201ENST00000474399 838 ntBASIC7.1□□□□□ -1.27
NEK3P51956 STRADBP1-201ENST00000478954 1281 ntBASIC7.1□□□□□ -1.27
NEK3P51956 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
NEK3P51956 OR8K2P-201ENST00000524645 927 ntBASIC7.1□□□□□ -1.27
NEK3P51956 OR10D4P-201ENST00000525892 951 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.1□□□□□ -1.27
NEK3P51956 AC074029.2-201ENST00000551045 634 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.1□□□□□ -1.27
NEK3P51956 AL121839.1-201ENST00000556233 1185 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC023827.2-201ENST00000566880 1061 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC096708.2-201ENST00000577676 512 ntBASIC7.1□□□□□ -1.27
NEK3P51956 RNU6-84P-201ENST00000607737 102 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC063962.1-201ENST00000608199 521 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.1□□□□□ -1.27
NEK3P51956 AC127071.1-201ENST00000624997 712 ntBASIC7.1□□□□□ -1.27
NEK3P51956 AC099654.15-201ENST00000639802 509 ntBASIC7.1□□□□□ -1.27
NEK3P51956 CDY5P-201ENST00000411487 1580 ntBASIC7.1□□□□□ -1.27
NEK3P51956 CDY9P-201ENST00000451397 1580 ntBASIC7.1□□□□□ -1.27
NEK3P51956 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.1□□□□□ -1.27
NEK3P51956 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.1□□□□□ -1.27
NEK3P51956 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NEK3P51956 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.1□□□□□ -1.27
NEK3P51956 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NEK3P51956 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
NEK3P51956 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.1□□□□□ -1.27
NEK3P51956 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEK3P51956 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms