Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SSR1P43307 FAM30C-201ENST00000561158 410 ntBASIC7.12□□□□□ -1.27
SSR1P43307 MRPL45P2-203ENST00000573318 473 ntBASIC7.12□□□□□ -1.27
SSR1P43307 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.12□□□□□ -1.27
SSR1P43307 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.12□□□□□ -1.27
SSR1P43307 MIR6829-201ENST00000620375 67 ntBASIC7.12□□□□□ -1.27
SSR1P43307 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.12□□□□□ -1.27
SSR1P43307 AL137058.3-201ENST00000624531 3099 ntBASIC7.12□□□□□ -1.27
SSR1P43307 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SSR1P43307 AC062022.1-201ENST00000451026 1684 ntBASIC7.12□□□□□ -1.27
SSR1P43307 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSR1P43307 LINC02019-201ENST00000608605 2060 ntBASIC7.12□□□□□ -1.27
SSR1P43307 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.11□□□□□ -1.27
SSR1P43307 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SSR1P43307 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 TUBBP10-201ENST00000427668 1301 ntBASIC7.11□□□□□ -1.27
SSR1P43307 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SSR1P43307 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 SNORA11D-201ENST00000408548 128 ntBASIC7.11□□□□□ -1.27
SSR1P43307 SNORA11E-201ENST00000408778 128 ntBASIC7.11□□□□□ -1.27
SSR1P43307 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.11□□□□□ -1.27
SSR1P43307 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.11□□□□□ -1.27
SSR1P43307 AC245884.2-201ENST00000426257 404 ntBASIC7.11□□□□□ -1.27
SSR1P43307 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 AC239367.3-201ENST00000428996 814 ntBASIC7.11□□□□□ -1.27
SSR1P43307 CRYGGP-201ENST00000443337 145 ntBASIC7.11□□□□□ -1.27
SSR1P43307 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.11□□□□□ -1.27
SSR1P43307 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.11□□□□□ -1.27
SSR1P43307 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 AC025271.1-201ENST00000485045 429 ntBASIC7.11□□□□□ -1.27
SSR1P43307 RN7SL561P-201ENST00000488553 281 ntBASIC7.11□□□□□ -1.27
SSR1P43307 RPL23AP80-201ENST00000495605 424 ntBASIC7.11□□□□□ -1.27
SSR1P43307 GOLGA5P1-201ENST00000507317 980 ntBASIC7.11□□□□□ -1.27
SSR1P43307 SNX18P23-201ENST00000510867 677 ntBASIC7.11□□□□□ -1.27
SSR1P43307 MTCYBP44-201ENST00000514835 823 ntBASIC7.11□□□□□ -1.27
SSR1P43307 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.11□□□□□ -1.27
SSR1P43307 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.11□□□□□ -1.27
SSR1P43307 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.11□□□□□ -1.27
SSR1P43307 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 AL121985.3-201ENST00000620690 523 ntBASIC7.11□□□□□ -1.27
SSR1P43307 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.11□□□□□ -1.27
SSR1P43307 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.11□□□□□ -1.27
SSR1P43307 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SSR1P43307 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 AC063923.1-201ENST00000478982 1619 ntBASIC7.11□□□□□ -1.27
SSR1P43307 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.11□□□□□ -1.27
SSR1P43307 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 MTCO1P7-201ENST00000419523 1542 ntBASIC7.11□□□□□ -1.27
SSR1P43307 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSR1P43307 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.11□□□□□ -1.27
SSR1P43307 NLRP3P1-201ENST00000622303 1785 ntBASIC7.1□□□□□ -1.27
SSR1P43307 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SSR1P43307 KYNUP2-201ENST00000582280 1329 ntBASIC7.1□□□□□ -1.27
SSR1P43307 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.1□□□□□ -1.27
SSR1P43307 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.1□□□□□ -1.27
SSR1P43307 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.1□□□□□ -1.27
SSR1P43307 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SSR1P43307 OR10D1P-201ENST00000355343 936 ntBASIC7.1□□□□□ -1.27
SSR1P43307 SNORA70.9-201ENST00000384370 135 ntBASIC7.1□□□□□ -1.27
SSR1P43307 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.1□□□□□ -1.27
SSR1P43307 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC7.1□□□□□ -1.27
SSR1P43307 AL663061.1-201ENST00000416625 580 ntBASIC7.1□□□□□ -1.27
SSR1P43307 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SSR1P43307 GAPDHP57-201ENST00000424400 585 ntBASIC7.1□□□□□ -1.27
SSR1P43307 OR52S1P-201ENST00000427016 937 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.1□□□□□ -1.27
SSR1P43307 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.1□□□□□ -1.27
SSR1P43307 AC027124.1-201ENST00000440852 466 ntBASIC7.1□□□□□ -1.27
SSR1P43307 CT45A11P-201ENST00000448043 1134 ntBASIC7.1□□□□□ -1.27
SSR1P43307 OR7E7P-201ENST00000455678 1012 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AC063943.2-201ENST00000495697 534 ntBASIC7.1□□□□□ -1.27
SSR1P43307 IGKV2D-38-201ENST00000518423 240 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.1□□□□□ -1.27
SSR1P43307 MIR4800-201ENST00000537353 80 ntBASIC7.1□□□□□ -1.27
SSR1P43307 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.1□□□□□ -1.27
SSR1P43307 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.1□□□□□ -1.27
SSR1P43307 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.1□□□□□ -1.27
SSR1P43307 AC069240.2-201ENST00000550242 609 ntBASIC7.1□□□□□ -1.27
SSR1P43307 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.1□□□□□ -1.27
SSR1P43307 PPIAP6-201ENST00000557078 499 ntBASIC7.1□□□□□ -1.27
SSR1P43307 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.1□□□□□ -1.27
SSR1P43307 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms