Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.15□□□□□ -1.42
RFC3P40938 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.15□□□□□ -1.42
RFC3P40938 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.15□□□□□ -1.42
RFC3P40938 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.15□□□□□ -1.42
RFC3P40938 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.15□□□□□ -1.42
RFC3P40938 AC012175.1-201ENST00000603755 531 ntBASIC6.15□□□□□ -1.42
RFC3P40938 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.15□□□□□ -1.42
RFC3P40938 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RFC3P40938 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.15□□□□□ -1.42
RFC3P40938 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.15□□□□□ -1.43
RFC3P40938 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.15□□□□□ -1.43
RFC3P40938 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFC3P40938 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
RFC3P40938 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFC3P40938 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFC3P40938 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFC3P40938 AC217777.1-201ENST00000570034 1471 ntBASIC6.15□□□□□ -1.43
RFC3P40938 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFC3P40938 AC090181.3-201ENST00000624777 1514 ntBASIC6.15□□□□□ -1.43
RFC3P40938 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
RFC3P40938 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
RFC3P40938 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RFC3P40938 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RFC3P40938 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 AL139384.2-201ENST00000613809 3590 ntBASIC6.14□□□□□ -1.43
RFC3P40938 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RFC3P40938 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.14□□□□□ -1.43
RFC3P40938 OOSP1-201ENST00000398992 1270 ntBASIC6.14□□□□□ -1.43
RFC3P40938 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.14□□□□□ -1.43
RFC3P40938 RN7SKP188-201ENST00000410789 317 ntBASIC6.14□□□□□ -1.43
RFC3P40938 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.14□□□□□ -1.43
RFC3P40938 MTND6P1-201ENST00000417434 424 ntBASIC6.14□□□□□ -1.43
RFC3P40938 RPL24P2-201ENST00000421023 475 ntBASIC6.14□□□□□ -1.43
RFC3P40938 RPS10P21-201ENST00000430654 475 ntBASIC6.14□□□□□ -1.43
RFC3P40938 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.14□□□□□ -1.43
RFC3P40938 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.14□□□□□ -1.43
RFC3P40938 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.14□□□□□ -1.43
RFC3P40938 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 RPL7AP23-201ENST00000482625 776 ntBASIC6.14□□□□□ -1.43
RFC3P40938 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.14□□□□□ -1.43
RFC3P40938 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.14□□□□□ -1.43
RFC3P40938 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.14□□□□□ -1.43
RFC3P40938 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.14□□□□□ -1.43
RFC3P40938 AC011500.1-201ENST00000601963 469 ntBASIC6.14□□□□□ -1.43
RFC3P40938 AC005828.7-201ENST00000607331 556 ntBASIC6.14□□□□□ -1.43
RFC3P40938 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 AC089999.3-201ENST00000622440 577 ntBASIC6.14□□□□□ -1.43
RFC3P40938 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 AL354702.2-202ENST00000641481 890 ntBASIC6.14□□□□□ -1.43
RFC3P40938 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RFC3P40938 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.14□□□□□ -1.43
RFC3P40938 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 AL033543.1-201ENST00000623440 13454 ntBASIC6.14□□□□□ -1.43
RFC3P40938 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFC3P40938 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RFC3P40938 RACGAP1P-201ENST00000550663 1879 ntBASIC6.13□□□□□ -1.43
RFC3P40938 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RFC3P40938 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RFC3P40938 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFC3P40938 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RFC3P40938 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.13□□□□□ -1.43
RFC3P40938 AC015871.3-201ENST00000618835 2261 ntBASIC6.13□□□□□ -1.43
RFC3P40938 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFC3P40938 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFC3P40938 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFC3P40938 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RFC3P40938 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.13□□□□□ -1.43
RFC3P40938 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFC3P40938 AC245036.1-201ENST00000391727 309 ntBASIC6.13□□□□□ -1.43
RFC3P40938 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms