Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC9.12□□□□□ -0.95
CPS1P31327 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC9.12□□□□□ -0.95
CPS1P31327 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC9.12□□□□□ -0.95
CPS1P31327 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CPS1P31327 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.12□□□□□ -0.95
CPS1P31327 CR383656.5-201ENST00000547616 1340 ntBASIC9.12□□□□□ -0.95
CPS1P31327 EML5-201ENST00000380664 5910 ntTSL 5 BASIC9.11□□□□□ -0.95
CPS1P31327 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
CPS1P31327 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CPS1P31327 RNU4-34P-201ENST00000410431 124 ntBASIC9.11□□□□□ -0.95
CPS1P31327 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC9.11□□□□□ -0.95
CPS1P31327 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CPS1P31327 CYP4F32P-201ENST00000426492 504 ntBASIC9.11□□□□□ -0.95
CPS1P31327 AC092017.2-201ENST00000427600 362 ntBASIC9.11□□□□□ -0.95
CPS1P31327 AC245452.2-201ENST00000435222 392 ntBASIC9.11□□□□□ -0.95
CPS1P31327 SUMO2P3-201ENST00000438311 288 ntBASIC9.11□□□□□ -0.95
CPS1P31327 AL353662.1-201ENST00000439099 327 ntBASIC9.11□□□□□ -0.95
CPS1P31327 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC9.11□□□□□ -0.95
CPS1P31327 SOCS5P1-201ENST00000440415 949 ntBASIC9.11□□□□□ -0.95
CPS1P31327 RPL36AP39-201ENST00000445859 318 ntBASIC9.11□□□□□ -0.95
CPS1P31327 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC9.11□□□□□ -0.95
CPS1P31327 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC9.11□□□□□ -0.95
CPS1P31327 IGHV4-55-201ENST00000520889 368 ntBASIC9.11□□□□□ -0.95
CPS1P31327 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC9.11□□□□□ -0.95
CPS1P31327 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC9.11□□□□□ -0.95
CPS1P31327 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC9.11□□□□□ -0.95
CPS1P31327 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC9.11□□□□□ -0.95
CPS1P31327 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC9.11□□□□□ -0.95
CPS1P31327 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC9.11□□□□□ -0.95
CPS1P31327 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
CPS1P31327 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
CPS1P31327 TANK-205ENST00000405852 2155 ntTSL 5 BASIC9.11□□□□□ -0.95
CPS1P31327 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CPS1P31327 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC9.11□□□□□ -0.95
CPS1P31327 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.11□□□□□ -0.95
CPS1P31327 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.11□□□□□ -0.95
CPS1P31327 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CPS1P31327 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC9.1□□□□□ -0.95
CPS1P31327 SNORA70-201ENST00000384436 135 ntBASIC9.1□□□□□ -0.95
CPS1P31327 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 AC073850.1-201ENST00000449243 255 ntBASIC9.1□□□□□ -0.95
CPS1P31327 RN7SL193P-201ENST00000491708 276 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC139272.1-201ENST00000505516 640 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC006499.3-201ENST00000506077 748 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC131392.1-201ENST00000506490 633 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC9.1□□□□□ -0.95
CPS1P31327 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CPS1P31327 AC073046.2-201ENST00000604756 527 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC024940.4-201ENST00000605507 246 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC092681.3-201ENST00000609463 678 ntBASIC9.1□□□□□ -0.95
CPS1P31327 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 MIR6085-201ENST00000618314 110 ntBASIC9.1□□□□□ -0.95
CPS1P31327 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 AC104964.2-201ENST00000562242 4641 ntBASIC9.1□□□□□ -0.95
CPS1P31327 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
CPS1P31327 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.1□□□□□ -0.95
CPS1P31327 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 SAGE3P-201ENST00000619800 1635 ntBASIC9.1□□□□□ -0.95
CPS1P31327 USP40-202ENST00000409945 1946 ntTSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC9.1□□□□□ -0.95
CPS1P31327 NDUFS5P5-201ENST00000437256 321 ntBASIC9.1□□□□□ -0.95
CPS1P31327 PCBP2P1-201ENST00000437262 977 ntBASIC9.1□□□□□ -0.95
CPS1P31327 DEFA11P-201ENST00000446470 261 ntBASIC9.1□□□□□ -0.95
CPS1P31327 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 RNA5SP434-201ENST00000516647 121 ntBASIC9.1□□□□□ -0.95
CPS1P31327 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.1□□□□□ -0.95
CPS1P31327 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC9.1□□□□□ -0.95
CPS1P31327 AC022404.1-201ENST00000555320 273 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC9.1□□□□□ -0.95
CPS1P31327 ZNF322P1-201ENST00000568013 1209 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC9.1□□□□□ -0.95
CPS1P31327 AL589674.2-201ENST00000604304 337 ntBASIC9.1□□□□□ -0.95
CPS1P31327 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC9.1□□□□□ -0.95
CPS1P31327 AL445649.1-201ENST00000615941 691 ntBASIC9.1□□□□□ -0.95
CPS1P31327 PFKM-232ENST00000629846 381 ntTSL 4 BASIC9.1□□□□□ -0.95
CPS1P31327 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC9.1□□□□□ -0.95
CPS1P31327 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CPS1P31327 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CPS1P31327 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC9.09□□□□□ -0.95
CPS1P31327 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC9.09□□□□□ -0.95
CPS1P31327 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
CPS1P31327 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
CPS1P31327 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms