Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.11□□□□□ -1.27
RB1P06400 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.11□□□□□ -1.27
RB1P06400 RPS7P12-201ENST00000422385 582 ntBASIC7.11□□□□□ -1.27
RB1P06400 AC239367.3-201ENST00000428996 814 ntBASIC7.11□□□□□ -1.27
RB1P06400 RPS29P14-201ENST00000431518 171 ntBASIC7.11□□□□□ -1.27
RB1P06400 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.11□□□□□ -1.27
RB1P06400 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.11□□□□□ -1.27
RB1P06400 COX4I1P2-201ENST00000447446 547 ntBASIC7.11□□□□□ -1.27
RB1P06400 OR52I1-201ENST00000450052 1050 ntBASIC7.11□□□□□ -1.27
RB1P06400 OR51A1P-201ENST00000511110 946 ntBASIC7.11□□□□□ -1.27
RB1P06400 SNORA81.2-201ENST00000516868 170 ntBASIC7.11□□□□□ -1.27
RB1P06400 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RB1P06400 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.11□□□□□ -1.27
RB1P06400 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.11□□□□□ -1.27
RB1P06400 NPIPB14P-203ENST00000532298 987 ntBASIC7.11□□□□□ -1.27
RB1P06400 OR4A21P-201ENST00000532759 944 ntBASIC7.11□□□□□ -1.27
RB1P06400 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.11□□□□□ -1.27
RB1P06400 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.11□□□□□ -1.27
RB1P06400 CTSLP2-201ENST00000580501 394 ntBASIC7.11□□□□□ -1.27
RB1P06400 AC060766.1-201ENST00000590824 627 ntBASIC7.11□□□□□ -1.27
RB1P06400 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.11□□□□□ -1.27
RB1P06400 AP001437.1-201ENST00000608783 456 ntBASIC7.11□□□□□ -1.27
RB1P06400 AC073862.4-201ENST00000622982 854 ntBASIC7.11□□□□□ -1.27
RB1P06400 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.11□□□□□ -1.27
RB1P06400 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RB1P06400 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RB1P06400 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RB1P06400 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
RB1P06400 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RB1P06400 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.11□□□□□ -1.27
RB1P06400 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RB1P06400 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.11□□□□□ -1.27
RB1P06400 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RB1P06400 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
RB1P06400 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.1□□□□□ -1.27
RB1P06400 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 ZNF812P-201ENST00000457674 1694 ntBASIC7.1□□□□□ -1.27
RB1P06400 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RB1P06400 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 UG0898H09-202ENST00000623646 7040 ntBASIC7.1□□□□□ -1.27
RB1P06400 RPL11P4-201ENST00000332269 436 ntBASIC7.1□□□□□ -1.27
RB1P06400 RN7SKP78-201ENST00000364711 318 ntBASIC7.1□□□□□ -1.27
RB1P06400 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RB1P06400 AC004386.1-201ENST00000393214 761 ntBASIC7.1□□□□□ -1.27
RB1P06400 RN7SKP296-201ENST00000411185 341 ntBASIC7.1□□□□□ -1.27
RB1P06400 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC7.1□□□□□ -1.27
RB1P06400 SULT1D1P-201ENST00000458020 882 ntBASIC7.1□□□□□ -1.27
RB1P06400 AC135721.2-201ENST00000464237 300 ntBASIC7.1□□□□□ -1.27
RB1P06400 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.1□□□□□ -1.27
RB1P06400 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.1□□□□□ -1.27
RB1P06400 RPL7P51-201ENST00000490532 749 ntBASIC7.1□□□□□ -1.27
RB1P06400 AC021220.1-201ENST00000507445 630 ntBASIC7.1□□□□□ -1.27
RB1P06400 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.1□□□□□ -1.27
RB1P06400 AC011352.2-201ENST00000514574 1016 ntBASIC7.1□□□□□ -1.27
RB1P06400 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.1□□□□□ -1.27
RB1P06400 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.1□□□□□ -1.27
RB1P06400 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.1□□□□□ -1.27
RB1P06400 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.1□□□□□ -1.27
RB1P06400 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.1□□□□□ -1.27
RB1P06400 AP000894.4-201ENST00000610185 483 ntBASIC7.1□□□□□ -1.27
RB1P06400 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RB1P06400 MIR4302-201ENST00000638058 60 ntBASIC7.1□□□□□ -1.27
RB1P06400 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 AC007938.1-201ENST00000562524 2902 ntBASIC7.1□□□□□ -1.27
RB1P06400 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RB1P06400 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RB1P06400 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.09□□□□□ -1.27
RB1P06400 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RB1P06400 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.09□□□□□ -1.27
RB1P06400 Z97989.1-201ENST00000531702 2421 ntBASIC7.09□□□□□ -1.27
RB1P06400 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms