Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 ADAM5-202ENST00000399789 1942 ntBASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 PSMC1P12-201ENST00000436509 1314 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 EEF1A1P4-201ENST00000359165 1405 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL731532.2-201ENST00000623542 1953 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 SNORA71A-201ENST00000364729 134 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 MIR1271-201ENST00000408537 86 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 RPL12P10-201ENST00000413498 498 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL358176.3-201ENST00000420757 454 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC013469.1-201ENST00000426985 403 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC104843.2-201ENST00000427666 297 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL121972.2-202ENST00000429386 586 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 EIF5AP4-201ENST00000441206 465 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL645937.3-201ENST00000453647 936 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC022795.1-201ENST00000473808 480 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 RN7SL635P-201ENST00000492123 296 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 BTG4P1-201ENST00000510421 183 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 RNA5SP400-201ENST00000517155 111 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 IGKV2-14-201ENST00000517571 347 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 FABP5P7-201ENST00000524732 405 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 B2M-202ENST00000544417 933 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 THAP2-202ENST00000547843 672 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 NF1P12-201ENST00000549593 583 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL139300.2-201ENST00000556332 553 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL023284.4-201ENST00000564248 374 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC016629.3-202ENST00000596427 890 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC006115.2-201ENST00000596823 202 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC011894.1-201ENST00000603255 456 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AL356458.1-201ENST00000604764 465 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC011899.3-201ENST00000608596 617 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC020910.4-201ENST00000612269 540 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC005086.2-201ENST00000624939 228 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC099654.15-201ENST00000639802 509 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AC007996.1-201ENST00000620414 2821 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 AP000705.2-201ENST00000433524 1386 ntBASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
LINC01558Q9Y6Z2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms