Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNU4-12P-201ENST00000365233 139 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 Y_RNA.509-201ENST00000384506 99 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AL079341.1-201ENST00000404701 1207 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ATF1P1-201ENST00000406040 927 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 OR4K6P-201ENST00000416478 897 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 PPIAP23-201ENST00000420099 497 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 DNAJC19P4-201ENST00000440115 345 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 MTND3P1-201ENST00000441336 220 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AL137845.2-201ENST00000444292 988 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 SSXP1-201ENST00000453640 473 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 CCNJP2-201ENST00000457810 1163 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AL079303.1-201ENST00000486611 463 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 PFN2-217ENST00000498307 556 ntTSL 4 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ARL2BPP6-201ENST00000512757 439 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 TCP11X3P-202ENST00000514289 1254 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 HIGD1AP17-201ENST00000554576 276 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC103792.1-201ENST00000603591 919 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 AC092354.1-201ENST00000606057 376 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 IGKV1OR1-1-201ENST00000613775 347 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ACTBP13-201ENST00000423971 3959 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 SNORD15A-201ENST00000384214 148 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 RNU6-932P-201ENST00000391108 106 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 CIR1P3-201ENST00000405137 479 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 RN7SKP285-201ENST00000410137 318 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 RPS4XP16-201ENST00000427198 791 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC105052.2-201ENST00000434317 794 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC013429.1-201ENST00000456604 422 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 RPS20P24-201ENST00000457473 361 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 CCDC75P1-201ENST00000469247 791 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC122714.1-201ENST00000502510 459 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 NACAP5-201ENST00000509863 636 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 RNU6-314P-201ENST00000516574 104 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 Y_RNA.701-201ENST00000516812 110 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC100823.2-201ENST00000518337 699 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AP001646.2-201ENST00000528645 1156 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AP000619.3-201ENST00000535634 1127 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AC087623.4-201ENST00000606593 695 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AL589743.7-201ENST00000612637 233 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 CR381653.2-201ENST00000624041 768 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 AL391380.1-201ENST00000439300 1432 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PHF8Q9UPP1 TRAF6P1-201ENST00000429404 1558 ntBASIC10.81□□□□□ -0.68
PHF8Q9UPP1 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms