Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC027449.1-201ENST00000608890 407 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC084036.1-201ENST00000609190 508 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AL050303.3-201ENST00000613704 284 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC026367.3-201ENST00000619032 590 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC211433.3-201ENST00000623770 375 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC008993.2-201ENST00000631744 806 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AL354702.2-202ENST00000641481 890 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 PWRN1-212ENST00000569908 1435 ntBASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
AMBRA1Q9C0C7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC011504.1-201ENST00000623331 4103 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 OR56A4-201ENST00000330728 1209 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RN7SKP85-201ENST00000411349 318 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 VN1R37P-201ENST00000419096 748 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 VDAC2P3-201ENST00000430995 828 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC013403.1-201ENST00000436954 263 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC027124.1-201ENST00000440852 466 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RPS7P4-201ENST00000444127 582 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC009963.4-201ENST00000448535 339 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 CYCSP44-201ENST00000448560 313 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 SLAMF6P1-201ENST00000451067 602 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 PSMA6P2-201ENST00000457574 686 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RPL7AP30-201ENST00000482859 796 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL776P-201ENST00000493390 268 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC093763.2-201ENST00000505334 1223 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC114322.1-201ENST00000506771 926 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RNA5SP96-201ENST00000516041 107 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 OR8X1P-201ENST00000534542 869 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 EGLN3P1-201ENST00000541727 720 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC106785.3-201ENST00000564064 847 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC104072.1-201ENST00000568817 668 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC027216.1-201ENST00000577726 685 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC006116.6-201ENST00000593258 1103 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL778P-201ENST00000607160 297 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 MIR6889-201ENST00000613185 59 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC048344.4-201ENST00000619744 527 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC078909.2-201ENST00000620584 398 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 AC087269.2-201ENST00000641764 975 ntBASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
AMBRA1Q9C0C7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms