Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 RNA5SP114-201ENST00000363780 113 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 ANXA2P2-201ENST00000435128 1020 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 RPS13P2-201ENST00000437890 455 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 RPL7P14-201ENST00000449851 741 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 SLC25A51P1-201ENST00000468432 871 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 RN7SL685P-201ENST00000476271 298 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC026774.2-201ENST00000513990 1098 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 HIGD1AP9-201ENST00000550710 279 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC084033.2-201ENST00000551532 967 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AP001267.4-201ENST00000602598 545 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AL590032.1-201ENST00000604920 252 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AL031777.2-201ENST00000611953 196 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 MIR7848-201ENST00000617402 101 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AL109924.4-201ENST00000623089 670 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC114546.4-201ENST00000624413 369 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC026108.1-201ENST00000635444 547 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 ZNF101P1-201ENST00000435701 1720 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 GNG5P2-201ENST00000372054 207 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RNA5SP474-201ENST00000391234 90 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 SNRPEP5-201ENST00000425442 278 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RPL5P2-201ENST00000429598 854 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RPL29P7-201ENST00000440227 457 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AC004692.1-201ENST00000455430 424 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RPL23AP64-201ENST00000469465 435 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RN7SL216P-201ENST00000471607 298 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RPS26P6-201ENST00000475156 348 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RPL7AP56-201ENST00000476420 791 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 PPP1R2P6-201ENST00000478565 588 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AC090142.2-201ENST00000483263 416 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 SCARNA18.2-201ENST00000516882 84 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 NDUFA3P2-201ENST00000531434 232 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AC140063.1-201ENST00000541343 259 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 AC005277.2-201ENST00000617898 390 ntBASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC28BQ9BUN5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC28BQ9BUN5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CCDC28BQ9BUN5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC28BQ9BUN5 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC28BQ9BUN5 AC011815.2-201ENST00000618230 2021 ntBASIC6.4□□□□□ -1.39
CCDC28BQ9BUN5 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC28BQ9BUN5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 ZNF806-201ENST00000438300 1774 ntBASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC28BQ9BUN5 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms