Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AF131215.2-201ENST00000531549 1710 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 BRWD1P3-201ENST00000428816 390 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AMYP1-201ENST00000440059 1023 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC106806.2-201ENST00000509365 500 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC027308.1-201ENST00000517993 110 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 ACTG1P15-201ENST00000570019 1063 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC087468.1-201ENST00000604365 630 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC124916.2-201ENST00000604416 224 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC006328.2-201ENST00000623198 397 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 AC012005.2-201ENST00000624333 397 ntBASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
OTOP1Q7RTM1 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 AC005614.1-201ENST00000598952 3653 ntBASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
OTOP1Q7RTM1 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 RNA5SP485-201ENST00000365053 119 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 RNA5SP172-201ENST00000365061 118 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AL590762.1-201ENST00000391782 432 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AL589655.1-201ENST00000405398 482 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 RN7SKP232-201ENST00000410170 290 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC104843.2-201ENST00000427666 297 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 DEFA11P-201ENST00000446470 261 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC084754.1-201ENST00000463466 464 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC074386.1-201ENST00000476560 767 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 MTND3P24-201ENST00000506306 329 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 MTND1P6-201ENST00000523621 946 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AP003049.1-201ENST00000529418 457 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 ULK4P1-202ENST00000565174 503 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AC242628.1-201ENST00000606810 391 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 AP005212.3-201ENST00000619964 528 ntBASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
OTOP1Q7RTM1 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.88□□□□□ -1.15
OTOP1Q7RTM1 AC104966.1-201ENST00000467010 1464 ntBASIC7.88□□□□□ -1.15
OTOP1Q7RTM1 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
OTOP1Q7RTM1 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.88□□□□□ -1.15
OTOP1Q7RTM1 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.88□□□□□ -1.15
OTOP1Q7RTM1 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
OTOP1Q7RTM1 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms