Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AC037198.3-201ENST00000616754 526 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 MIR6837-201ENST00000620884 64 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AL133243.4-201ENST00000623116 3109 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 U3.7-201ENST00000363668 216 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 AL050335.1-201ENST00000396909 869 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 RPL23AP27-201ENST00000415161 451 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 RPL34P3-201ENST00000421454 338 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 DEFA11P-201ENST00000446470 261 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 RPL23AP68-201ENST00000480924 445 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 MIR6085-201ENST00000618314 110 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 SAMMSON-227ENST00000642114 1199 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AL592429.1-201ENST00000403909 1473 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AC245047.5-201ENST00000437312 556 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 SNORA43.3-201ENST00000517240 103 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 AC091078.2-201ENST00000557145 559 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PARM1-201ENST00000307428 5011 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 AL645927.1-201ENST00000396783 406 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 AL035660.1-201ENST00000422041 222 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 RPL7AP6-201ENST00000477943 801 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 HMGN2P6-201ENST00000551091 273 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 RNA5SP183-201ENST00000362452 119 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 SNORA43.1-201ENST00000364863 140 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms