Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AC010624.4-201ENST00000597606 1351 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AC099654.3-201ENST00000447087 1546 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CKS1BP61024 OR5E1P-201ENST00000305754 927 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 RNU1-21P-201ENST00000363327 163 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 RNA5SP260-201ENST00000363849 111 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 RNU1-59P-201ENST00000364829 162 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 SNORA70.8-201ENST00000384231 136 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CKS1BP61024 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AC017104.2-201ENST00000417000 321 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC231533.2-201ENST00000419045 978 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 EIF4A1P2-201ENST00000422633 1220 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CKS1BP61024 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AC083899.1-201ENST00000454465 3819 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC111000.1-201ENST00000514545 713 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AC011352.2-201ENST00000514574 1016 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 SETP21-201ENST00000514799 892 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 RNU6-1334P-201ENST00000516032 105 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC4.68□□□□□ -1.66
CKS1BP61024 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC087257.2-201ENST00000538759 928 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC4.68□□□□□ -1.66
CKS1BP61024 AL390334.1-201ENST00000556395 450 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC4.68□□□□□ -1.66
CKS1BP61024 AC107993.1-201ENST00000591343 684 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 OR5AH1P-201ENST00000595968 283 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC4.68□□□□□ -1.66
CKS1BP61024 AL390058.1-201ENST00000603834 629 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.68□□□□□ -1.66
CKS1BP61024 U1.25-201ENST00000614085 162 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 U1.34-201ENST00000618578 162 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 U1.31-201ENST00000620022 160 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 AC079456.1-201ENST00000624010 480 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.68□□□□□ -1.66
CKS1BP61024 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AC079753.1-201ENST00000623243 3868 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AL513523.1-201ENST00000417868 1309 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CKS1BP61024 AL121768.1-201ENST00000613917 2544 ntBASIC4.68□□□□□ -1.66
CKS1BP61024 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CKS1BP61024 AC012254.3-201ENST00000591183 2117 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC4.67□□□□□ -1.66
CKS1BP61024 AC093844.1-201ENST00000514910 1361 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 AL137141.1-201ENST00000624622 4836 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CKS1BP61024 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 CREM-218ENST00000460270 1416 ntTSL 2 BASIC4.67□□□□□ -1.66
CKS1BP61024 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CKS1BP61024 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.67□□□□□ -1.66
CKS1BP61024 RNA5SP448-201ENST00000363151 111 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RNA5SP472-201ENST00000363868 119 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RN7SKP237-201ENST00000364663 301 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CKS1BP61024 OR2T4-202ENST00000366475 1047 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RN7SKP271-201ENST00000410528 320 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RPS26P38-201ENST00000414476 348 ntBASIC4.67□□□□□ -1.66
CKS1BP61024 RPSAP1-201ENST00000421328 880 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms