Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 SNORD35A-201ENST00000363389 86 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AL589994.1-201ENST00000404962 340 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AL929472.1-201ENST00000417484 429 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC117434.1-201ENST00000419971 836 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AC097523.2-201ENST00000435551 652 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC118758.1-202ENST00000454719 225 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 SULT1D1P-201ENST00000458020 882 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC026826.1-201ENST00000493002 361 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 AC018797.1-201ENST00000510791 255 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 NPM1P21-201ENST00000513394 762 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 RNU6-751P-201ENST00000516382 101 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC122713.1-201ENST00000518368 1015 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AL133399.1-201ENST00000527476 298 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC135983.3-201ENST00000528049 1226 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.92□□□□□ -1.14
RHBDL3P58872 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 AC106785.4-201ENST00000569492 412 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC004232.1-201ENST00000571388 208 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC011921.2-201ENST00000589465 152 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC138473.1-201ENST00000605717 526 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC018692.2-201ENST00000624130 348 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 AC116631.1-202ENST00000640984 683 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 AC022613.3-201ENST00000560740 1346 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 CAP1P2-201ENST00000417455 1409 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 AC005702.3-201ENST00000585345 1447 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RHBDL3P58872 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
RHBDL3P58872 API5P1-201ENST00000424316 1510 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.92□□□□□ -1.14
RHBDL3P58872 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 AP005139.1-201ENST00000580702 1647 ntBASIC7.92□□□□□ -1.14
RHBDL3P58872 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.92□□□□□ -1.14
RHBDL3P58872 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RHBDL3P58872 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.91□□□□□ -1.14
RHBDL3P58872 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 AC104162.1-201ENST00000430831 2382 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
RHBDL3P58872 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
RHBDL3P58872 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
RHBDL3P58872 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
RHBDL3P58872 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
RHBDL3P58872 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
RHBDL3P58872 VN1R12P-201ENST00000403778 876 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.91□□□□□ -1.14
RHBDL3P58872 AL360013.1-201ENST00000419031 858 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 RPL12P43-201ENST00000420608 499 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 YY1P1-201ENST00000427625 668 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.91□□□□□ -1.14
RHBDL3P58872 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RHBDL3P58872 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.91□□□□□ -1.14
RHBDL3P58872 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.91□□□□□ -1.14
RHBDL3P58872 RN7SL39P-201ENST00000462264 297 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 RN7SL170P-201ENST00000487098 295 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.91□□□□□ -1.14
RHBDL3P58872 OR9L1P-201ENST00000529493 933 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
RHBDL3P58872 AC134669.1-201ENST00000581275 672 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.91□□□□□ -1.14
RHBDL3P58872 AL499605.1-201ENST00000604628 403 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 AL157762.1-201ENST00000619612 415 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 AC131009.3-201ENST00000621809 287 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 AC120057.5-201ENST00000623840 154 ntBASIC7.91□□□□□ -1.14
RHBDL3P58872 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
RHBDL3P58872 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms