Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL356806.1-201ENST00000422524 916 ntBASIC7.13□□□□□ -1.27
NEK3P51956 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 MYO5BP3-201ENST00000431872 1279 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AL138787.1-202ENST00000437804 898 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC009518.3-201ENST00000438972 253 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 AC022730.1-201ENST00000473114 568 ntBASIC7.13□□□□□ -1.27
NEK3P51956 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 AC026826.1-201ENST00000493002 361 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC105420.1-201ENST00000504389 582 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 AC079866.1-201ENST00000534985 1220 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.13□□□□□ -1.27
NEK3P51956 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 AL109628.1-201ENST00000556877 366 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 AC104184.1-201ENST00000607513 721 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC008626.2-201ENST00000624425 248 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AL049541.2-201ENST00000626377 555 ntBASIC7.13□□□□□ -1.27
NEK3P51956 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
NEK3P51956 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 DDX18P6-201ENST00000450119 1997 ntBASIC7.13□□□□□ -1.27
NEK3P51956 AC137056.2-201ENST00000624055 1958 ntBASIC7.13□□□□□ -1.27
NEK3P51956 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.13□□□□□ -1.27
NEK3P51956 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.13□□□□□ -1.27
NEK3P51956 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NEK3P51956 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.12□□□□□ -1.27
NEK3P51956 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
NEK3P51956 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.12□□□□□ -1.27
NEK3P51956 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
NEK3P51956 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NEK3P51956 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NEK3P51956 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.12□□□□□ -1.27
NEK3P51956 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.12□□□□□ -1.27
NEK3P51956 NPM1P26-201ENST00000426339 738 ntBASIC7.12□□□□□ -1.27
NEK3P51956 PRDX1P1-201ENST00000449329 596 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AP005202.1-201ENST00000489915 867 ntBASIC7.12□□□□□ -1.27
NEK3P51956 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 AC008868.1-201ENST00000509786 737 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.12□□□□□ -1.27
NEK3P51956 SCARNA6-201ENST00000515982 265 ntBASIC7.12□□□□□ -1.27
NEK3P51956 SCARNA11.1-201ENST00000516918 132 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.12□□□□□ -1.27
NEK3P51956 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 CARSP2-201ENST00000520688 277 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AC016144.1-201ENST00000548175 1087 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AL135978.1-201ENST00000553618 1266 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.12□□□□□ -1.27
NEK3P51956 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.12□□□□□ -1.27
NEK3P51956 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.12□□□□□ -1.27
NEK3P51956 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.12□□□□□ -1.27
NEK3P51956 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AL445649.1-201ENST00000615941 691 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AC004943.1-203ENST00000624370 1074 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.12□□□□□ -1.27
NEK3P51956 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 AC140479.4-205ENST00000636339 820 ntBASIC7.12□□□□□ -1.27
NEK3P51956 AC087269.2-201ENST00000641764 975 ntBASIC7.12□□□□□ -1.27
NEK3P51956 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.12□□□□□ -1.27
NEK3P51956 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 UGT2B27P-201ENST00000505092 1620 ntBASIC7.12□□□□□ -1.27
NEK3P51956 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEK3P51956 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.12□□□□□ -1.27
NEK3P51956 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.11□□□□□ -1.27
NEK3P51956 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEK3P51956 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
NEK3P51956 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms