Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AMELX-201ENST00000348912 737 ntTSL 5 BASIC11.32□□□□□ -0.6
SMARCA4P51532 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMARCA4P51532 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC11.32□□□□□ -0.6
SMARCA4P51532 AC079600.1-201ENST00000550326 297 ntBASIC11.32□□□□□ -0.6
SMARCA4P51532 AC092375.1-201ENST00000550410 637 ntBASIC11.32□□□□□ -0.6
SMARCA4P51532 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SMARCA4P51532 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC11.32□□□□□ -0.6
SMARCA4P51532 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMARCA4P51532 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMARCA4P51532 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
SMARCA4P51532 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SMARCA4P51532 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC11.32□□□□□ -0.6
SMARCA4P51532 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMARCA4P51532 NEK2P4-201ENST00000425793 1329 ntBASIC11.32□□□□□ -0.6
SMARCA4P51532 AL512310.3-201ENST00000547023 1335 ntBASIC11.32□□□□□ -0.6
SMARCA4P51532 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC11.32□□□□□ -0.6
SMARCA4P51532 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC11.32□□□□□ -0.6
SMARCA4P51532 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AL121776.1-201ENST00000429337 372 ntBASIC11.31□□□□□ -0.6
SMARCA4P51532 DEFA9P-201ENST00000433042 285 ntBASIC11.31□□□□□ -0.6
SMARCA4P51532 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC090651.1-201ENST00000567865 634 ntBASIC11.31□□□□□ -0.6
SMARCA4P51532 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC005393.1-201ENST00000617916 584 ntBASIC11.31□□□□□ -0.6
SMARCA4P51532 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC11.31□□□□□ -0.6
SMARCA4P51532 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC11.31□□□□□ -0.6
SMARCA4P51532 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SMARCA4P51532 NHS-204ENST00000615422 8860 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC11.31□□□□□ -0.6
SMARCA4P51532 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC11.31□□□□□ -0.6
SMARCA4P51532 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC11.31□□□□□ -0.6
SMARCA4P51532 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMARCA4P51532 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC11.3□□□□□ -0.6
SMARCA4P51532 AC078880.4-201ENST00000617627 1749 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMARCA4P51532 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMARCA4P51532 TATDN2P3-201ENST00000452855 3665 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 DPPA2P3-201ENST00000411853 655 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 RPS14P4-201ENST00000415880 418 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 AL513325.1-201ENST00000417716 1034 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 FTLP8-201ENST00000446770 267 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 SNX18P26-201ENST00000458433 740 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 RN7SL834P-201ENST00000461450 286 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 TSACC-207ENST00000470342 601 ntTSL 2 BASIC11.3□□□□□ -0.6
SMARCA4P51532 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 SETP21-201ENST00000514799 892 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 IGKV1D-22-201ENST00000518953 324 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 SMARCE1P3-201ENST00000553649 1231 ntBASIC11.3□□□□□ -0.6
SMARCA4P51532 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC11.3□□□□□ -0.6
SMARCA4P51532 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC11.3□□□□□ -0.6
SMARCA4P51532 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC11.3□□□□□ -0.6
SMARCA4P51532 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC11.3□□□□□ -0.6
SMARCA4P51532 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SMARCA4P51532 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMARCA4P51532 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SMARCA4P51532 MAPK10-287ENST00000641217 3037 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMARCA4P51532 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMARCA4P51532 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMARCA4P51532 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMARCA4P51532 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SMARCA4P51532 RNA5SP132-201ENST00000364725 118 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC11.29□□□□□ -0.6
SMARCA4P51532 AC245060.4-201ENST00000413293 1121 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC11.29□□□□□ -0.6
SMARCA4P51532 PPIAP10-201ENST00000438675 458 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 ZNF619P1-201ENST00000446539 752 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 TMEM97P2-201ENST00000517841 403 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 AC023818.2-201ENST00000623817 2304 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
SMARCA4P51532 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMARCA4P51532 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC11.29□□□□□ -0.6
SMARCA4P51532 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC11.29□□□□□ -0.6
SMARCA4P51532 AP002833.3-201ENST00000625075 2265 ntBASIC11.29□□□□□ -0.6
SMARCA4P51532 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC11.29□□□□□ -0.6
SMARCA4P51532 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms