Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX2P48431 RPL12P43-201ENST00000420608 499 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AC073464.3-201ENST00000422564 712 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX2P48431 MTCYBP32-201ENST00000427945 1084 ntBASIC5.98□□□□□ -1.45
SOX2P48431 RPS13P2-201ENST00000437890 455 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 FCF1P6-201ENST00000456841 595 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AC092902.1-201ENST00000486999 259 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AC079594.1-201ENST00000489757 331 ntBASIC5.98□□□□□ -1.45
SOX2P48431 TPT1P8-201ENST00000510120 555 ntBASIC5.98□□□□□ -1.45
SOX2P48431 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
SOX2P48431 SCARNA1-201ENST00000517138 166 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AC073581.1-201ENST00000519036 575 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX2P48431 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC5.98□□□□□ -1.45
SOX2P48431 RN7SL25P-201ENST00000583862 260 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX2P48431 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.98□□□□□ -1.45
SOX2P48431 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 AL359704.2-201ENST00000604335 521 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AL356608.1-201ENST00000610034 820 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AP005212.3-201ENST00000619964 528 ntBASIC5.98□□□□□ -1.45
SOX2P48431 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.98□□□□□ -1.45
SOX2P48431 AC091059.2-201ENST00000623355 614 ntBASIC5.98□□□□□ -1.45
SOX2P48431 LINC00216-201ENST00000623548 1126 ntBASIC5.98□□□□□ -1.45
SOX2P48431 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.98□□□□□ -1.45
SOX2P48431 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 AL359694.2-201ENST00000567753 1615 ntBASIC5.98□□□□□ -1.45
SOX2P48431 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.98□□□□□ -1.45
SOX2P48431 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SOX2P48431 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
SOX2P48431 AC006213.6-201ENST00000623722 4179 ntBASIC5.98□□□□□ -1.45
SOX2P48431 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 GCNT6-201ENST00000379591 934 ntBASIC5.97□□□□□ -1.45
SOX2P48431 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 RN7SKP188-201ENST00000410789 317 ntBASIC5.97□□□□□ -1.45
SOX2P48431 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 MTND4P11-201ENST00000417020 1058 ntBASIC5.97□□□□□ -1.45
SOX2P48431 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 RCC2P2-201ENST00000422174 918 ntBASIC5.97□□□□□ -1.45
SOX2P48431 PPIL1P1-201ENST00000423936 499 ntBASIC5.97□□□□□ -1.45
SOX2P48431 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX2P48431 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 AL451136.1-201ENST00000435399 325 ntBASIC5.97□□□□□ -1.45
SOX2P48431 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX2P48431 RNU7-157P-201ENST00000459600 66 ntBASIC5.97□□□□□ -1.45
SOX2P48431 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX2P48431 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 FTH1P8-201ENST00000498161 514 ntBASIC5.97□□□□□ -1.45
SOX2P48431 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX2P48431 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX2P48431 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.97□□□□□ -1.45
SOX2P48431 IGLVV-66-201ENST00000523818 341 ntBASIC5.97□□□□□ -1.45
SOX2P48431 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SOX2P48431 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 AL031846.1-201ENST00000560933 314 ntBASIC5.97□□□□□ -1.45
SOX2P48431 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
SOX2P48431 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.97□□□□□ -1.45
SOX2P48431 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.97□□□□□ -1.45
SOX2P48431 SIGLEC31P-201ENST00000594237 551 ntBASIC5.97□□□□□ -1.45
SOX2P48431 AL953862.2-201ENST00000603089 820 ntBASIC5.97□□□□□ -1.45
SOX2P48431 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.97□□□□□ -1.45
SOX2P48431 AC097504.2-201ENST00000608088 454 ntBASIC5.97□□□□□ -1.45
SOX2P48431 AC016597.2-201ENST00000613256 341 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms