Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 MKI67P1-201ENST00000604297 1460 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC013268.3-201ENST00000262716 2324 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC010132.4-201ENST00000569883 1368 ntBASIC6.24□□□□□ -1.41
SOX3P41225 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.24□□□□□ -1.41
SOX3P41225 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX3P41225 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX3P41225 RN7SKP184-201ENST00000362348 333 ntBASIC6.24□□□□□ -1.41
SOX3P41225 UBBP1-201ENST00000392399 473 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC026310.1-201ENST00000396004 378 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AL034417.1-201ENST00000399343 800 ntBASIC6.24□□□□□ -1.41
SOX3P41225 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 AL356121.1-201ENST00000442911 156 ntBASIC6.24□□□□□ -1.41
SOX3P41225 GAPDHP20-201ENST00000444107 1007 ntBASIC6.24□□□□□ -1.41
SOX3P41225 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX3P41225 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AL034369.1-201ENST00000453808 477 ntBASIC6.24□□□□□ -1.41
SOX3P41225 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX3P41225 RPS7P11-201ENST00000484240 586 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX3P41225 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX3P41225 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 AC007068.2-201ENST00000543168 395 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC092375.1-201ENST00000550410 637 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
SOX3P41225 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX3P41225 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX3P41225 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX3P41225 MIR4301-201ENST00000577203 66 ntBASIC6.24□□□□□ -1.41
SOX3P41225 PRELID3BP3-201ENST00000584963 545 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX3P41225 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX3P41225 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX3P41225 AC244100.4-201ENST00000617747 388 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC211486.4-201ENST00000621495 113 ntBASIC6.24□□□□□ -1.41
SOX3P41225 AC005514.1-201ENST00000623521 208 ntBASIC6.24□□□□□ -1.41
SOX3P41225 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX3P41225 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.24□□□□□ -1.41
SOX3P41225 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SOX3P41225 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 LCOR-201ENST00000286067 4542 ntBASIC6.24□□□□□ -1.41
SOX3P41225 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SOX3P41225 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 AC110716.2-201ENST00000563865 3945 ntBASIC6.23□□□□□ -1.41
SOX3P41225 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX3P41225 AC009120.2-204ENST00000621548 2032 ntBASIC6.23□□□□□ -1.41
SOX3P41225 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX3P41225 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SOX3P41225 RNU1-5P-201ENST00000362684 144 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AC019178.1-201ENST00000392337 440 ntBASIC6.23□□□□□ -1.41
SOX3P41225 FDPSP5-201ENST00000399474 1057 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AL590635.1-201ENST00000406314 586 ntBASIC6.23□□□□□ -1.41
SOX3P41225 RNA5SP155-201ENST00000411154 129 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AL451136.1-201ENST00000435399 325 ntBASIC6.23□□□□□ -1.41
SOX3P41225 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.23□□□□□ -1.41
SOX3P41225 SNRPBP1-201ENST00000443634 282 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AP003385.3-201ENST00000472498 287 ntBASIC6.23□□□□□ -1.41
SOX3P41225 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 RN7SL382P-201ENST00000482631 282 ntBASIC6.23□□□□□ -1.41
SOX3P41225 SNRPCP11-201ENST00000492453 205 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX3P41225 AC091849.1-201ENST00000509920 121 ntBASIC6.23□□□□□ -1.41
SOX3P41225 RN7SKP196-201ENST00000516267 345 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX3P41225 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX3P41225 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX3P41225 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX3P41225 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX3P41225 AC060766.1-201ENST00000590824 627 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 AC048341.3-201ENST00000619323 491 ntBASIC6.23□□□□□ -1.41
SOX3P41225 AC061999.1-201ENST00000624454 177 ntBASIC6.23□□□□□ -1.41
SOX3P41225 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 FANCD2P2-201ENST00000437591 1400 ntBASIC6.23□□□□□ -1.41
SOX3P41225 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX3P41225 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX3P41225 XKRY2-202ENST00000623874 1581 ntBASIC6.23□□□□□ -1.41
SOX3P41225 XKRY-202ENST00000624960 1581 ntBASIC6.23□□□□□ -1.41
SOX3P41225 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
SOX3P41225 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms