Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.17□□□□□ -1.42
RFC3P40938 WBP1LP11-201ENST00000586141 328 ntBASIC6.17□□□□□ -1.42
RFC3P40938 RPL7AP69-201ENST00000595306 806 ntBASIC6.17□□□□□ -1.42
RFC3P40938 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.17□□□□□ -1.42
RFC3P40938 GAPDHP41-201ENST00000613707 975 ntBASIC6.17□□□□□ -1.42
RFC3P40938 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.17□□□□□ -1.42
RFC3P40938 SNORA16A-202ENST00000628458 135 ntBASIC6.17□□□□□ -1.42
RFC3P40938 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.17□□□□□ -1.42
RFC3P40938 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RFC3P40938 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.17□□□□□ -1.42
RFC3P40938 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.17□□□□□ -1.42
RFC3P40938 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFC3P40938 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RFC3P40938 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.16□□□□□ -1.42
RFC3P40938 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
RFC3P40938 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.16□□□□□ -1.42
RFC3P40938 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 RNA5SP85-201ENST00000365378 119 ntBASIC6.16□□□□□ -1.42
RFC3P40938 RNA5SP474-201ENST00000391234 90 ntBASIC6.16□□□□□ -1.42
RFC3P40938 UBBP1-201ENST00000392399 473 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.16□□□□□ -1.42
RFC3P40938 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 AC010086.1-201ENST00000437359 1052 ntBASIC6.16□□□□□ -1.42
RFC3P40938 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 SNRPBP1-201ENST00000443634 282 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.16□□□□□ -1.42
RFC3P40938 AC234771.2-201ENST00000445718 597 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AL445991.1-201ENST00000450381 475 ntBASIC6.16□□□□□ -1.42
RFC3P40938 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 AC099340.1-201ENST00000475247 599 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC091849.1-201ENST00000509920 121 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 RN7SKP183-201ENST00000517169 324 ntBASIC6.16□□□□□ -1.42
RFC3P40938 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFC3P40938 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.16□□□□□ -1.42
RFC3P40938 AC005519.1-201ENST00000554490 601 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.16□□□□□ -1.42
RFC3P40938 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.16□□□□□ -1.42
RFC3P40938 ULK4P1-202ENST00000565174 503 ntBASIC6.16□□□□□ -1.42
RFC3P40938 MIR3157-201ENST00000578688 85 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC087575.1-201ENST00000585087 229 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC012368.3-201ENST00000604190 219 ntBASIC6.16□□□□□ -1.42
RFC3P40938 NDUFB9P1-201ENST00000604683 510 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC111186.1-201ENST00000604684 130 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AL683813.2-201ENST00000605245 502 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AC004241.2-201ENST00000614562 444 ntBASIC6.16□□□□□ -1.42
RFC3P40938 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.16□□□□□ -1.42
RFC3P40938 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RFC3P40938 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.16□□□□□ -1.42
RFC3P40938 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.16□□□□□ -1.42
RFC3P40938 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
RFC3P40938 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RFC3P40938 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.15□□□□□ -1.42
RFC3P40938 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
RFC3P40938 TTC41P-205ENST00000551270 3963 ntBASIC6.15□□□□□ -1.42
RFC3P40938 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 AL596244.1-201ENST00000567068 3779 ntBASIC6.15□□□□□ -1.42
RFC3P40938 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RFC3P40938 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
RFC3P40938 RN7SKP171-201ENST00000364417 303 ntBASIC6.15□□□□□ -1.42
RFC3P40938 RNA5SP140-201ENST00000364524 92 ntBASIC6.15□□□□□ -1.42
RFC3P40938 SNORA11.5-201ENST00000408163 128 ntBASIC6.15□□□□□ -1.42
RFC3P40938 GAPDHP19-201ENST00000431768 1005 ntBASIC6.15□□□□□ -1.42
RFC3P40938 AC128677.1-201ENST00000436016 442 ntBASIC6.15□□□□□ -1.42
RFC3P40938 AC092106.2-201ENST00000436597 487 ntBASIC6.15□□□□□ -1.42
RFC3P40938 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.15□□□□□ -1.42
RFC3P40938 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.15□□□□□ -1.42
RFC3P40938 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.15□□□□□ -1.42
RFC3P40938 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.15□□□□□ -1.42
RFC3P40938 RPS7P10-201ENST00000464254 603 ntBASIC6.15□□□□□ -1.42
RFC3P40938 RN7SL649P-201ENST00000496974 275 ntBASIC6.15□□□□□ -1.42
RFC3P40938 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.15□□□□□ -1.42
RFC3P40938 AC093664.1-201ENST00000511779 289 ntBASIC6.15□□□□□ -1.42
RFC3P40938 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RFC3P40938 AP003033.2-201ENST00000528901 805 ntBASIC6.15□□□□□ -1.42
RFC3P40938 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms