Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AP001153.1-201ENST00000641024 338 ntBASIC8.29□□□□□ -1.08
LIG1P18858 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 WASF5P-205ENST00000428639 1455 ntBASIC8.29□□□□□ -1.08
LIG1P18858 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.29□□□□□ -1.08
LIG1P18858 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.29□□□□□ -1.08
LIG1P18858 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 AL391380.1-201ENST00000439300 1432 ntBASIC8.29□□□□□ -1.08
LIG1P18858 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 CDY5P-201ENST00000411487 1580 ntBASIC8.28□□□□□ -1.08
LIG1P18858 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 CDY9P-201ENST00000451397 1580 ntBASIC8.28□□□□□ -1.08
LIG1P18858 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 NHP2P2-201ENST00000396362 460 ntBASIC8.28□□□□□ -1.08
LIG1P18858 RPS21P8-201ENST00000413365 247 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 TCEA1P2-201ENST00000420496 906 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC093107.1-201ENST00000422772 609 ntBASIC8.28□□□□□ -1.08
LIG1P18858 CYP4F32P-201ENST00000426492 504 ntBASIC8.28□□□□□ -1.08
LIG1P18858 USP9YP11-201ENST00000427537 717 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.28□□□□□ -1.08
LIG1P18858 KCTD10P1-201ENST00000434203 625 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC019185.3-201ENST00000438805 323 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.28□□□□□ -1.08
LIG1P18858 RPL24P8-201ENST00000446071 474 ntBASIC8.28□□□□□ -1.08
LIG1P18858 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 AC114755.1-201ENST00000453101 868 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.28□□□□□ -1.08
LIG1P18858 AC013429.1-201ENST00000456604 422 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.28□□□□□ -1.08
LIG1P18858 RPL5P11-201ENST00000498068 893 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.28□□□□□ -1.08
LIG1P18858 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.28□□□□□ -1.08
LIG1P18858 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.28□□□□□ -1.08
LIG1P18858 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.28□□□□□ -1.08
LIG1P18858 PCNAP1-202ENST00000595299 752 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC012065.3-201ENST00000602736 439 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC008385.1-201ENST00000604421 355 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC090425.2-201ENST00000608818 501 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC008759.3-201ENST00000613300 508 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC011939.3-201ENST00000613686 466 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AP003497.2-201ENST00000624220 967 ntBASIC8.28□□□□□ -1.08
LIG1P18858 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
LIG1P18858 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 TUBBP10-201ENST00000427668 1301 ntBASIC8.28□□□□□ -1.08
LIG1P18858 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.28□□□□□ -1.08
LIG1P18858 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LIG1P18858 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.28□□□□□ -1.08
LIG1P18858 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
LIG1P18858 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LIG1P18858 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.27□□□□□ -1.08
LIG1P18858 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LIG1P18858 LPAL2-203ENST00000454031 2498 ntBASIC8.27□□□□□ -1.09
LIG1P18858 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
LIG1P18858 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
LIG1P18858 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LIG1P18858 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LIG1P18858 SAMMSON-203ENST00000641005 2168 ntBASIC8.27□□□□□ -1.09
LIG1P18858 MTND4P4-201ENST00000439033 1366 ntBASIC8.27□□□□□ -1.09
LIG1P18858 AC092725.2-201ENST00000567658 1389 ntBASIC8.27□□□□□ -1.09
LIG1P18858 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.27□□□□□ -1.09
LIG1P18858 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
LIG1P18858 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
LIG1P18858 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LIG1P18858 SNORA73B-201ENST00000363217 204 ntBASIC8.27□□□□□ -1.09
LIG1P18858 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LIG1P18858 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LIG1P18858 SNX18P13-201ENST00000412442 529 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms