Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD4P09016 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.17□□□□□ -1.42
HOXD4P09016 NXPE2P1-201ENST00000543705 726 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD4P09016 PPIAP6-201ENST00000557078 499 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD4P09016 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HOXD4P09016 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC026951.2-201ENST00000613847 241 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 MIR6823-201ENST00000622118 61 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC005858.3-201ENST00000624756 589 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 AC011504.1-201ENST00000623331 4103 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HOXD4P09016 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD4P09016 AC007998.4-201ENST00000612496 2533 ntBASIC6.17□□□□□ -1.42
HOXD4P09016 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
HOXD4P09016 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HOXD4P09016 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXD4P09016 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 CDC42P6-201ENST00000421246 576 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD4P09016 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 VN1R53P-201ENST00000429536 957 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 OR51P1P-201ENST00000447547 942 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD4P09016 AL034399.1-201ENST00000451535 380 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 RN7SL70P-201ENST00000478322 302 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 RN7SL379P-201ENST00000479912 293 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 RPL29P23-201ENST00000486188 442 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD4P09016 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 AC090888.3-201ENST00000558917 509 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD4P09016 AC012175.1-201ENST00000603755 531 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 AC005899.7-201ENST00000618199 588 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 AC018659.2-201ENST00000624690 715 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 AC011471.4-201ENST00000638271 216 ntBASIC6.16□□□□□ -1.42
HOXD4P09016 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD4P09016 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HOXD4P09016 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD4P09016 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD4P09016 TPTE2P2-201ENST00000403471 1466 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXD4P09016 AC217777.1-201ENST00000570034 1471 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD4P09016 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD4P09016 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD4P09016 AC089998.1-201ENST00000548575 3141 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD4P09016 DLEU2L-201ENST00000371086 3555 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD4P09016 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD4P09016 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD4P09016 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXD4P09016 RN7SKP171-201ENST00000364417 303 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 RN7SKP62-201ENST00000384539 329 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 UBBP1-201ENST00000392399 473 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXD4P09016 AL359885.1-201ENST00000415786 903 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 AL139184.1-202ENST00000422303 222 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 GAPDHP57-201ENST00000424400 585 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 RPL12P11-201ENST00000439970 501 ntBASIC6.15□□□□□ -1.42
HOXD4P09016 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms