Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 EIF1-207ENST00000591776 797 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL390058.1-201ENST00000603834 629 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC135050.6-202ENST00000613584 392 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 FAM27E3-202ENST00000614611 340 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 HOTTIP_2.1-201ENST00000616633 376 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC106795.5-201ENST00000623288 454 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC073488.7-201ENST00000633785 778 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 MAPK10-287ENST00000641217 3037 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AC087516.1-201ENST00000561236 2428 ntBASIC4.93□□□□□ -1.62
HLA-DQA1P01909 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1P01909 AL451064.2-201ENST00000623514 1654 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 SAMM50P1-201ENST00000455403 1399 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC092070.2-203ENST00000598377 3644 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RNA5SP35-201ENST00000391257 129 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RN7SKP148-201ENST00000410179 275 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC023141.1-201ENST00000419418 379 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 HCG25-217ENST00000422366 702 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 OR7E117P-201ENST00000422682 1112 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RPL7AP14-201ENST00000424041 802 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AL590399.2-201ENST00000427536 309 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AL022237.1-201ENST00000446663 358 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 HIST1H2APS6-201ENST00000448609 364 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RN7SL308P-201ENST00000464971 297 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RN7SL282P-201ENST00000479676 297 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RN7SL187P-201ENST00000495587 303 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 EIF3KP1-201ENST00000513279 656 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RN7SKP11-201ENST00000517018 287 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RN7SL270P-201ENST00000579643 281 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 MIR5705-201ENST00000579870 89 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RN7SL25P-201ENST00000583862 260 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC078909.2-201ENST00000620584 398 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 FGL2-202ENST00000637771 989 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AC123769.1-201ENST00000530992 3192 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AL355834.1-201ENST00000556602 3965 ntBASIC4.92□□□□□ -1.62
HLA-DQA1P01909 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQA1P01909 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms