Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AC087392.3-202ENST00000358446 1754 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 API5P1-201ENST00000424316 1510 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 SPATA31C1-201ENST00000420021 3895 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC119674.1-204ENST00000641348 1343 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 PSMA6P1-201ENST00000400275 741 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 GTF3AP6-201ENST00000432585 986 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 PCNPP2-201ENST00000441651 455 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 RPL23AP64-201ENST00000469465 435 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 RPL23AP68-201ENST00000480924 445 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC005017.1-201ENST00000482002 490 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC022415.1-202ENST00000486612 523 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 RN7SL230P-201ENST00000580835 303 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AL157899.1-201ENST00000604110 936 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 MIR7109-201ENST00000613748 65 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AC114546.4-201ENST00000624413 369 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 AL132796.3-201ENST00000624703 900 ntBASIC7.11□□□□□ -1.27
NXF3Q9H4D5 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.11□□□□□ -1.27
NXF3Q9H4D5 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 AC127024.8-201ENST00000623719 2094 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 AC007485.2-201ENST00000623493 1667 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 RPL11P4-201ENST00000332269 436 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 RNU1-65P-201ENST00000363919 148 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 RNA5SP279-201ENST00000365513 117 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 FABP5P1-201ENST00000423401 411 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 VN1R20P-201ENST00000425215 966 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 OR1N1-202ENST00000619659 939 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 AL591926.1-201ENST00000620542 217 ntBASIC7.1□□□□□ -1.27
NXF3Q9H4D5 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms