Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 LINC01616-201ENST00000561816 2280 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SSX3Q99909 AL157831.2-201ENST00000564681 3095 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SSX3Q99909 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 NRIR-201ENST00000366140 799 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SSX3Q99909 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.79□□□□□ -1.48
SSX3Q99909 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 AL356968.2-201ENST00000412769 1257 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 RPL21P33-201ENST00000444831 484 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 SLAMF6P1-201ENST00000451067 602 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 SRP68P2-201ENST00000456184 254 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AC117395.2-201ENST00000463122 1128 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 RPL5P16-201ENST00000471467 790 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 RN7SL306P-201ENST00000492941 296 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 RN7SL775P-201ENST00000498361 336 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 RPL7L1P7-201ENST00000509986 724 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC027801.3-201ENST00000515049 698 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.79□□□□□ -1.48
SSX3Q99909 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC107952.1-201ENST00000524200 376 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AP004607.6-201ENST00000525033 1202 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.79□□□□□ -1.48
SSX3Q99909 NPM1P5-201ENST00000557228 838 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AP005901.4-201ENST00000577336 569 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.79□□□□□ -1.48
SSX3Q99909 PRR13P5-201ENST00000596581 442 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AC092960.1-201ENST00000604762 351 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 MIR6774-201ENST00000614651 70 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC026108.1-201ENST00000635444 547 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 MIR665-201ENST00000635949 72 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AL356585.10-201ENST00000641883 123 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX3Q99909 AC093844.1-201ENST00000514910 1361 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 AL035563.1-201ENST00000609087 1539 ntBASIC5.79□□□□□ -1.48
SSX3Q99909 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSX3Q99909 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SSX3Q99909 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 AL591848.4-201ENST00000567832 3472 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SSX3Q99909 RNA5SP472-201ENST00000363868 119 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SSX3Q99909 RNU6-1055P-201ENST00000391085 107 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX3Q99909 AC007068.1-201ENST00000396690 844 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 SUMO2P13-201ENST00000403109 272 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 MRPL32P1-201ENST00000406301 247 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX3Q99909 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 CYP4F32P-201ENST00000426492 504 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX3Q99909 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX3Q99909 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX3Q99909 AL161722.1-201ENST00000446972 1032 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 AC005517.1-201ENST00000452091 489 ntBASIC5.78□□□□□ -1.48
SSX3Q99909 RBMY2EP-202ENST00000456360 940 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms