Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ACTR6P1-201ENST00000514311 1104 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 RN7SKP11-201ENST00000517018 287 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 IGLVV-66-201ENST00000523818 341 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 OR4A13P-201ENST00000529316 942 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AP003168.1-201ENST00000530091 307 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AC015818.6-201ENST00000584274 634 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 SNORA35B-201ENST00000607417 129 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AL138693.1-201ENST00000622219 129 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AC073862.4-201ENST00000622982 854 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 OR4G1P-202ENST00000641173 1788 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 CASC19-243ENST00000641588 1546 ntBASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CHMP4CQ96CF2 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 MAPK10-344ENST00000641718 3746 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 Z93929.1-201ENST00000418200 1475 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 RN7SKP47-201ENST00000365347 328 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 LDHAP5-201ENST00000394996 622 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 FABP5P1-201ENST00000423401 411 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 PUDPP2-201ENST00000431423 643 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 MYL6P3-201ENST00000436904 432 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 FABP5P2-201ENST00000439042 408 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 GOT2P2-201ENST00000450663 1251 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 PSMA6P2-201ENST00000457574 686 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 RN7SL267P-201ENST00000485107 261 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC021820.1-201ENST00000525564 808 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AL049874.4-201ENST00000557593 255 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 MIR5095-201ENST00000578844 88 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC005479.3-201ENST00000602790 431 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC005229.3-201ENST00000603438 323 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 GMCL1P2-201ENST00000605230 823 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 BNIP3P7-201ENST00000605641 516 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AL162574.2-201ENST00000614618 657 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AP005212.3-201ENST00000619964 528 ntBASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.15□□□□□ -1.1
CHMP4CQ96CF2 AL022323.4-201ENST00000623980 13120 ntBASIC8.15□□□□□ -1.11
CHMP4CQ96CF2 AC092821.3-202ENST00000641304 2767 ntBASIC8.15□□□□□ -1.11
CHMP4CQ96CF2 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHMP4CQ96CF2 AC009135.2-201ENST00000624136 1768 ntBASIC8.15□□□□□ -1.11
CHMP4CQ96CF2 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 AC010401.2-201ENST00000575137 4934 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 MTCO1P22-201ENST00000604619 1360 ntBASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4CQ96CF2 OR7E25P-201ENST00000344844 931 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms