Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 RNY4P14-201ENST00000363656 96 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 SNORD65C-201ENST00000390962 71 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AL034372.1-201ENST00000407586 754 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 TBL1YP1-201ENST00000440297 1026 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 CYP4F25P-201ENST00000446871 520 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 OR5S1P-201ENST00000453063 951 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC063955.1-201ENST00000462872 685 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 RN7SL74P-201ENST00000464966 299 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC068042.1-201ENST00000482222 1148 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC008629.3-201ENST00000505786 586 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 OR4A1P-201ENST00000532342 920 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AP005597.3-201ENST00000532369 799 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC007751.2-201ENST00000534173 291 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC106028.5-201ENST00000610332 395 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AP003122.6-201ENST00000623831 495 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC005355.2-201ENST00000625064 484 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 GC-208ENST00000513476 1567 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC105342.1-201ENST00000378334 6848 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 METTL5-204ENST00000409340 472 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AL354751.2-201ENST00000415471 210 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 RN7SL218P-201ENST00000464637 299 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 DAZAP2P1-201ENST00000475212 503 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 RN7SL107P-201ENST00000478127 283 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC008837.2-201ENST00000513076 418 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC138866.1-201ENST00000514522 497 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 snoZ278.1-201ENST00000517059 112 ntBASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.8□□□□□ -1
SCUBE3Q8IX30 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SCUBE3Q8IX30 AC008127.2-201ENST00000549925 1075 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms