Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RHBDL3P58872 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.94□□□□□ -1.14
RHBDL3P58872 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 TTC3P1-201ENST00000399586 6081 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.94□□□□□ -1.14
RHBDL3P58872 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
RHBDL3P58872 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 MIR621-201ENST00000384919 96 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.94□□□□□ -1.14
RHBDL3P58872 AL139158.1-201ENST00000424719 340 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AC245047.1-201ENST00000433276 873 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AL138899.2-201ENST00000439139 499 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.94□□□□□ -1.14
RHBDL3P58872 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 AC018645.1-201ENST00000505003 109 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 SCARNA5-201ENST00000516201 276 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.94□□□□□ -1.14
RHBDL3P58872 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.94□□□□□ -1.14
RHBDL3P58872 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
RHBDL3P58872 NPM1P5-201ENST00000557228 838 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AC090888.3-201ENST00000558917 509 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.94□□□□□ -1.14
RHBDL3P58872 AC091768.1-201ENST00000609258 930 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AL589743.6-201ENST00000611025 117 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AL356752.1-201ENST00000615844 593 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 AC010325.3-201ENST00000641084 394 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 AL121936.2-201ENST00000641935 662 ntBASIC7.94□□□□□ -1.14
RHBDL3P58872 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RHBDL3P58872 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.94□□□□□ -1.14
RHBDL3P58872 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
RHBDL3P58872 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RHBDL3P58872 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 AC022507.1-201ENST00000548349 1505 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
RHBDL3P58872 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.93□□□□□ -1.14
RHBDL3P58872 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.93□□□□□ -1.14
RHBDL3P58872 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.93□□□□□ -1.14
RHBDL3P58872 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 AC009237.3-203ENST00000442128 3551 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.93□□□□□ -1.14
RHBDL3P58872 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
RHBDL3P58872 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 RNU1-65P-201ENST00000363919 148 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 RNA5SP232-201ENST00000364144 119 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 RNA5SP77-201ENST00000365394 120 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.93□□□□□ -1.14
RHBDL3P58872 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.93□□□□□ -1.14
RHBDL3P58872 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RHBDL3P58872 PRELID1P1-201ENST00000403549 660 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 RN7SKP296-201ENST00000411185 341 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 RPS20P25-201ENST00000412447 352 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.93□□□□□ -1.14
RHBDL3P58872 AC083862.1-201ENST00000427378 1242 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.93□□□□□ -1.14
RHBDL3P58872 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.93□□□□□ -1.14
RHBDL3P58872 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.93□□□□□ -1.14
RHBDL3P58872 CTSLP6-201ENST00000458273 1002 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 AC104849.1-201ENST00000462623 405 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 AC138409.2-202ENST00000507274 458 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.93□□□□□ -1.14
RHBDL3P58872 AC011352.2-201ENST00000514574 1016 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 SNORA74.1-201ENST00000516320 180 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.93□□□□□ -1.14
RHBDL3P58872 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.93□□□□□ -1.14
RHBDL3P58872 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC7.93□□□□□ -1.14
RHBDL3P58872 RN7SL270P-201ENST00000579643 281 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 MIR4271-201ENST00000582451 67 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 AC004805.3-201ENST00000603178 310 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 AC092944.2-201ENST00000605443 889 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.93□□□□□ -1.14
RHBDL3P58872 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 CCDC162P-202ENST00000368966 6751 ntBASIC7.93□□□□□ -1.14
RHBDL3P58872 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.93□□□□□ -1.14
RHBDL3P58872 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RHBDL3P58872 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms