Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CDY18P-201ENST00000438294 1609 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 RN7SKP211-201ENST00000363328 315 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 RNA5SP297-201ENST00000391029 113 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 RNA5SP35-201ENST00000391257 129 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 LSM5-202ENST00000409292 538 ntTSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL354868.1-201ENST00000417077 482 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC007562.1-201ENST00000421819 517 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC023274.2-201ENST00000445264 521 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL022237.1-201ENST00000446663 358 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC103563.5-201ENST00000455643 364 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL022319.1-201ENST00000458183 1167 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 SNX18P26-201ENST00000458433 740 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC108751.3-201ENST00000461814 1020 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 RN7SL306P-201ENST00000492941 296 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC090539.2-201ENST00000523425 671 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC233702.7-202ENST00000582941 211 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL157899.1-201ENST00000604110 936 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC097641.3-201ENST00000613523 464 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AC024255.1-201ENST00000614376 102 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL109924.4-201ENST00000623089 670 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 CASC19-260ENST00000641828 2001 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AP002800.1-201ENST00000624982 2225 ntBASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.17□□□□□ -1.58
RBFOX3A6NFN3 SAMM50P1-201ENST00000455403 1399 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 OR5M2P-202ENST00000641241 4242 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 NCOA4P2-201ENST00000340589 1813 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 CREM-218ENST00000460270 1416 ntTSL 2 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AL591135.1-201ENST00000401578 5914 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 RNA5SP448-201ENST00000363151 111 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 MIR152-201ENST00000385212 87 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 CYCSP17-201ENST00000407870 315 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 RPL7AP14-201ENST00000424041 802 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 RPL5P2-201ENST00000429598 854 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 RPL7AP56-201ENST00000476420 791 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 RN7SL379P-201ENST00000479912 293 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 RN7SL775P-201ENST00000498361 336 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 TECRP2-201ENST00000503270 928 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 AC097486.1-201ENST00000515331 210 ntBASIC5.16□□□□□ -1.58
RBFOX3A6NFN3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms