Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC018765.1-201ENST00000623357 3446 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC089998.1-201ENST00000548575 3141 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC090983.1-201ENST00000623426 3897 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC022893.2-201ENST00000564832 3296 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AL645733.1-201ENST00000402250 217 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 RPS11P7-201ENST00000442125 465 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 SUMO2P10-201ENST00000452006 288 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 RN7SL72P-201ENST00000460697 269 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC009962.1-201ENST00000567327 3813 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC106785.4-201ENST00000569492 412 ntBASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC10.06□□□□□ -0.8
RIMBP3Q9UFD9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 RNA5SP183-201ENST00000362452 119 ntBASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 U8.4-201ENST00000363626 134 ntBASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 RNA5SP394-201ENST00000364216 119 ntBASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 NPM1P51-201ENST00000443470 744 ntBASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 AC013399.1-201ENST00000450311 418 ntBASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 RN7SL547P-201ENST00000490793 290 ntBASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RIMBP3Q9UFD9 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC099521.1-201ENST00000482557 334 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 SUMO2P7-201ENST00000511179 285 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 CDC42P3-201ENST00000518493 633 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC004825.1-201ENST00000555068 586 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 MIR4776-2-201ENST00000580204 80 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC022106.1-201ENST00000612834 766 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AL445528.2-201ENST00000620582 470 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 MAPK10-347ENST00000641762 2856 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC079949.2-201ENST00000617117 2933 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 MBP-206ENST00000397863 4800 ntTSL 3 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms