Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 AC005034.4-201ENST00000603612 899 ntBASIC6.95□□□□□ -1.3
NUP43Q8NFH3 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 AC131159.1-201ENST00000621854 213 ntBASIC6.95□□□□□ -1.3
NUP43Q8NFH3 ZNF876P-202ENST00000398732 1485 ntBASIC6.95□□□□□ -1.3
NUP43Q8NFH3 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 AC017002.4-201ENST00000604721 1525 ntBASIC6.95□□□□□ -1.3
NUP43Q8NFH3 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NUP43Q8NFH3 AL357556.1-201ENST00000421884 1388 ntBASIC6.95□□□□□ -1.3
NUP43Q8NFH3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AL356473.1-201ENST00000406203 1408 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 KYNUP1-201ENST00000466683 1406 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 WNK1-220ENST00000574564 1401 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC092999.1-201ENST00000624004 1924 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RNA5SP448-201ENST00000363151 111 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RNU6-481P-201ENST00000384194 107 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC073052.1-201ENST00000440417 714 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC016772.1-201ENST00000444170 1261 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RPSAP49-201ENST00000445182 886 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 CDC42P2-201ENST00000448566 569 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC092691.2-201ENST00000461787 803 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RN7SL549P-201ENST00000478997 282 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 RN7SKP5-201ENST00000517045 272 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 OR4A2P-201ENST00000527276 913 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC004923.2-201ENST00000529649 369 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 MIR5192-201ENST00000579892 92 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 CUX2P1-201ENST00000606426 298 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AL136985.2-201ENST00000607372 535 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 MIR7162-201ENST00000611134 69 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC007786.3-201ENST00000615154 596 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC090617.9-201ENST00000623751 147 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 AC110769.3-201ENST00000624567 1173 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 CASC19-274ENST00000642018 970 ntBASIC6.94□□□□□ -1.3
NUP43Q8NFH3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NUP43Q8NFH3 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms