Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.56□□□□□ -1.68
RPL39P62891 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPL39P62891 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
RPL39P62891 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
RPL39P62891 AC092724.1-201ENST00000624623 3397 ntBASIC4.56□□□□□ -1.68
RPL39P62891 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPL39P62891 CCDC150P1-201ENST00000537123 2215 ntBASIC4.56□□□□□ -1.68
RPL39P62891 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC4.56□□□□□ -1.68
RPL39P62891 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RPL39P62891 CCAT2-201ENST00000630920 1752 ntBASIC4.55□□□□□ -1.68
RPL39P62891 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 AC009831.5-201ENST00000624000 3189 ntBASIC4.55□□□□□ -1.68
RPL39P62891 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 AC093844.1-201ENST00000514910 1361 ntBASIC4.55□□□□□ -1.68
RPL39P62891 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.55□□□□□ -1.68
RPL39P62891 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RPL39P62891 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RPL39P62891 SNORA55-201ENST00000364587 135 ntBASIC4.55□□□□□ -1.68
RPL39P62891 RNU1-59P-201ENST00000364829 162 ntBASIC4.55□□□□□ -1.68
RPL39P62891 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.55□□□□□ -1.68
RPL39P62891 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 AL359694.1-201ENST00000403247 604 ntBASIC4.55□□□□□ -1.68
RPL39P62891 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC4.55□□□□□ -1.68
RPL39P62891 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 SNRPEP5-201ENST00000425442 278 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 PRPS1P2-201ENST00000430496 937 ntBASIC4.55□□□□□ -1.68
RPL39P62891 VDAC2P3-201ENST00000430995 828 ntBASIC4.55□□□□□ -1.68
RPL39P62891 KRT18P53-201ENST00000431919 117 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 BX005266.3-201ENST00000443013 1075 ntBASIC4.55□□□□□ -1.68
RPL39P62891 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 AC004692.1-201ENST00000455430 424 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC236972.4-201ENST00000458091 963 ntBASIC4.55□□□□□ -1.68
RPL39P62891 SNORA35.1-201ENST00000458908 128 ntBASIC4.55□□□□□ -1.68
RPL39P62891 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 AC091849.1-201ENST00000509920 121 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.55□□□□□ -1.68
RPL39P62891 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 SNRPCP6-201ENST00000528310 210 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC4.55□□□□□ -1.68
RPL39P62891 SSU72P6-201ENST00000532644 488 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 OR4A40P-201ENST00000533878 948 ntBASIC4.55□□□□□ -1.68
RPL39P62891 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC4.55□□□□□ -1.68
RPL39P62891 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 AL589765.5-201ENST00000596133 515 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 AC122710.3-201ENST00000606566 541 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC012640.3-201ENST00000607847 430 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AL352984.2-202ENST00000613699 155 ntBASIC4.55□□□□□ -1.68
RPL39P62891 U1.25-201ENST00000614085 162 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AL445649.1-201ENST00000615941 691 ntBASIC4.55□□□□□ -1.68
RPL39P62891 U1.41-201ENST00000617626 165 ntBASIC4.55□□□□□ -1.68
RPL39P62891 U1.34-201ENST00000618578 162 ntBASIC4.55□□□□□ -1.68
RPL39P62891 U1.31-201ENST00000620022 160 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC017037.4-201ENST00000624526 826 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC243725.1-201ENST00000637164 436 ntBASIC4.55□□□□□ -1.68
RPL39P62891 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RPL39P62891 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RPL39P62891 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPL39P62891 HSP90AA2P-201ENST00000530115 2196 ntBASIC4.55□□□□□ -1.68
RPL39P62891 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.55□□□□□ -1.68
RPL39P62891 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RPL39P62891 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPL39P62891 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 AP002512.4-202ENST00000641599 4530 ntBASIC4.54□□□□□ -1.68
RPL39P62891 ST7-203ENST00000393443 2360 ntTSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPL39P62891 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 SNORA38B-201ENST00000363524 131 ntBASIC4.54□□□□□ -1.68
RPL39P62891 U3.14-201ENST00000365363 227 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms