Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 AL049697.3-201ENST00000406493 982 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 AC099782.1-201ENST00000425889 474 ntBASIC5.45□□□□□ -1.54
LMO4P61968 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.45□□□□□ -1.54
LMO4P61968 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 GAPDHP59-201ENST00000435908 267 ntBASIC5.45□□□□□ -1.54
LMO4P61968 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 RBMY2AP-201ENST00000445405 1157 ntBASIC5.45□□□□□ -1.54
LMO4P61968 COX4I1P2-201ENST00000447446 547 ntBASIC5.45□□□□□ -1.54
LMO4P61968 RBMY2CP-201ENST00000448575 1157 ntBASIC5.45□□□□□ -1.54
LMO4P61968 RBMY2DP-202ENST00000448881 1157 ntBASIC5.45□□□□□ -1.54
LMO4P61968 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 RN7SL552P-201ENST00000462094 276 ntBASIC5.45□□□□□ -1.54
LMO4P61968 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.45□□□□□ -1.54
LMO4P61968 AC021074.2-201ENST00000468434 172 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AC021006.1-201ENST00000489849 553 ntBASIC5.45□□□□□ -1.54
LMO4P61968 RPL5P14-201ENST00000494197 878 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AC091874.2-201ENST00000505889 720 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.45□□□□□ -1.54
LMO4P61968 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 AL162632.2-201ENST00000553933 399 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.45□□□□□ -1.54
LMO4P61968 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.45□□□□□ -1.54
LMO4P61968 RN7SL208P-201ENST00000577964 296 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.45□□□□□ -1.54
LMO4P61968 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.45□□□□□ -1.54
LMO4P61968 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.45□□□□□ -1.54
LMO4P61968 uc_338.31-201ENST00000615595 186 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AC018692.2-201ENST00000624130 348 ntBASIC5.45□□□□□ -1.54
LMO4P61968 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 AC123769.2-201ENST00000624332 5984 ntBASIC5.45□□□□□ -1.54
LMO4P61968 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LMO4P61968 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 TMCC1P1-201ENST00000518897 1980 ntBASIC5.45□□□□□ -1.54
LMO4P61968 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.45□□□□□ -1.54
LMO4P61968 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.45□□□□□ -1.54
LMO4P61968 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LMO4P61968 AC087392.3-202ENST00000358446 1754 ntBASIC5.44□□□□□ -1.54
LMO4P61968 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.44□□□□□ -1.54
LMO4P61968 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 API5P1-201ENST00000424316 1510 ntBASIC5.44□□□□□ -1.54
LMO4P61968 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LMO4P61968 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 RN7SKP237-201ENST00000364663 301 ntBASIC5.44□□□□□ -1.54
LMO4P61968 RNA5SP279-201ENST00000365513 117 ntBASIC5.44□□□□□ -1.54
LMO4P61968 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 AC003045.1-201ENST00000398779 713 ntBASIC5.44□□□□□ -1.54
LMO4P61968 RPL5P20-201ENST00000403848 896 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC017035.1-201ENST00000411999 1115 ntBASIC5.44□□□□□ -1.54
LMO4P61968 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.44□□□□□ -1.54
LMO4P61968 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 FABP5P1-201ENST00000423401 411 ntBASIC5.44□□□□□ -1.54
LMO4P61968 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMO4P61968 AC002069.1-201ENST00000429649 1159 ntBASIC5.44□□□□□ -1.54
LMO4P61968 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.44□□□□□ -1.54
LMO4P61968 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.44□□□□□ -1.54
LMO4P61968 AC117395.1-201ENST00000487390 403 ntBASIC5.44□□□□□ -1.54
LMO4P61968 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.44□□□□□ -1.54
LMO4P61968 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.44□□□□□ -1.54
LMO4P61968 AC087360.1-201ENST00000518788 616 ntBASIC5.44□□□□□ -1.54
LMO4P61968 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.44□□□□□ -1.54
LMO4P61968 AL133399.1-201ENST00000527476 298 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.44□□□□□ -1.54
LMO4P61968 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC090888.3-201ENST00000558917 509 ntBASIC5.44□□□□□ -1.54
LMO4P61968 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms