Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 EIF2S2P4-201ENST00000461070 984 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AC117392.1-201ENST00000487061 596 ntBASIC6.01□□□□□ -1.45
SOX2P48431 OR9N1P-201ENST00000491296 333 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 COX6CP11-201ENST00000555293 229 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX2P48431 BOLA2P1-201ENST00000584794 232 ntBASIC6.01□□□□□ -1.45
SOX2P48431 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.01□□□□□ -1.45
SOX2P48431 AC026979.4-201ENST00000606555 645 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AC120053.1-201ENST00000607706 736 ntBASIC6.01□□□□□ -1.45
SOX2P48431 AC091768.1-201ENST00000609258 930 ntBASIC6.01□□□□□ -1.45
SOX2P48431 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 AL445647.2-201ENST00000615170 130 ntBASIC6.01□□□□□ -1.45
SOX2P48431 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
SOX2P48431 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX2P48431 Z93929.1-201ENST00000418200 1475 ntBASIC6.01□□□□□ -1.45
SOX2P48431 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 AP000866.6-201ENST00000638898 3579 ntBASIC6.01□□□□□ -1.45
SOX2P48431 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SOX2P48431 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX2P48431 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX2P48431 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SOX2P48431 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 CDY19P-201ENST00000411668 1613 ntBASIC6□□□□□ -1.45
SOX2P48431 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 CDY18P-201ENST00000438294 1609 ntBASIC6□□□□□ -1.45
SOX2P48431 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
SOX2P48431 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
SOX2P48431 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6□□□□□ -1.45
SOX2P48431 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
SOX2P48431 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX2P48431 RNA5SP333-201ENST00000363466 118 ntBASIC6□□□□□ -1.45
SOX2P48431 RNA5SP334-201ENST00000364825 118 ntBASIC6□□□□□ -1.45
SOX2P48431 SNORA72.3-201ENST00000365074 132 ntBASIC6□□□□□ -1.45
SOX2P48431 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6□□□□□ -1.45
SOX2P48431 IFNA12P-201ENST00000413147 571 ntBASIC6□□□□□ -1.45
SOX2P48431 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 AL713922.1-201ENST00000416477 747 ntBASIC6□□□□□ -1.45
SOX2P48431 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6□□□□□ -1.45
SOX2P48431 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 GTF3AP6-201ENST00000432585 986 ntBASIC6□□□□□ -1.45
SOX2P48431 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SOX2P48431 HIST1H2APS6-201ENST00000448609 364 ntBASIC6□□□□□ -1.45
SOX2P48431 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 RPL7P17-201ENST00000470927 724 ntBASIC6□□□□□ -1.45
SOX2P48431 CHCHD2P7-201ENST00000508008 452 ntBASIC6□□□□□ -1.45
SOX2P48431 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SOX2P48431 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6□□□□□ -1.45
SOX2P48431 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6□□□□□ -1.45
SOX2P48431 UBE2CP4-201ENST00000561405 535 ntBASIC6□□□□□ -1.45
SOX2P48431 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6□□□□□ -1.45
SOX2P48431 MTND1P8-201ENST00000571424 950 ntBASIC6□□□□□ -1.45
SOX2P48431 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms