Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CIITAP33076 AL391262.1-201ENST00000556558 1992 ntBASIC7.5□□□□□ -1.21
CIITAP33076 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 AL596244.1-201ENST00000567068 3779 ntBASIC7.49□□□□□ -1.21
CIITAP33076 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.49□□□□□ -1.21
CIITAP33076 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.49□□□□□ -1.21
CIITAP33076 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 AC007012.2-201ENST00000623206 1676 ntBASIC7.49□□□□□ -1.21
CIITAP33076 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 NPM1P23-201ENST00000440193 849 ntBASIC7.49□□□□□ -1.21
CIITAP33076 AC236972.4-201ENST00000458091 963 ntBASIC7.49□□□□□ -1.21
CIITAP33076 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.49□□□□□ -1.21
CIITAP33076 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.49□□□□□ -1.21
CIITAP33076 AC083906.1-201ENST00000509298 406 ntBASIC7.49□□□□□ -1.21
CIITAP33076 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.49□□□□□ -1.21
CIITAP33076 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.49□□□□□ -1.21
CIITAP33076 AL162632.2-201ENST00000553933 399 ntBASIC7.49□□□□□ -1.21
CIITAP33076 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.49□□□□□ -1.21
CIITAP33076 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.49□□□□□ -1.21
CIITAP33076 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.49□□□□□ -1.21
CIITAP33076 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.49□□□□□ -1.21
CIITAP33076 AL390877.1-201ENST00000605704 214 ntBASIC7.49□□□□□ -1.21
CIITAP33076 AC015819.1-201ENST00000613588 663 ntBASIC7.49□□□□□ -1.21
CIITAP33076 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 SYT14P1-202ENST00000600441 1448 ntBASIC7.49□□□□□ -1.21
CIITAP33076 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
CIITAP33076 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CIITAP33076 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.49□□□□□ -1.21
CIITAP33076 AC087392.3-202ENST00000358446 1754 ntBASIC7.48□□□□□ -1.21
CIITAP33076 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.48□□□□□ -1.21
CIITAP33076 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 RN7SKP184-201ENST00000362348 333 ntBASIC7.48□□□□□ -1.21
CIITAP33076 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 AL133260.1-201ENST00000405720 405 ntBASIC7.48□□□□□ -1.21
CIITAP33076 RANP6-201ENST00000413691 644 ntBASIC7.48□□□□□ -1.21
CIITAP33076 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CIITAP33076 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
CIITAP33076 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.48□□□□□ -1.21
CIITAP33076 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.48□□□□□ -1.21
CIITAP33076 BZW1P1-201ENST00000454901 1240 ntBASIC7.48□□□□□ -1.21
CIITAP33076 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 RPL23AP64-201ENST00000469465 435 ntBASIC7.48□□□□□ -1.21
CIITAP33076 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 RPL9P15-201ENST00000491096 532 ntBASIC7.48□□□□□ -1.21
CIITAP33076 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 SUMO2P7-201ENST00000511179 285 ntBASIC7.48□□□□□ -1.21
CIITAP33076 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.48□□□□□ -1.21
CIITAP33076 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.48□□□□□ -1.21
CIITAP33076 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.48□□□□□ -1.21
CIITAP33076 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.48□□□□□ -1.21
CIITAP33076 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.48□□□□□ -1.21
CIITAP33076 AL356986.1-201ENST00000604085 341 ntBASIC7.48□□□□□ -1.21
CIITAP33076 AL157899.1-201ENST00000604110 936 ntBASIC7.48□□□□□ -1.21
CIITAP33076 AC020765.1-201ENST00000604296 328 ntBASIC7.48□□□□□ -1.21
CIITAP33076 AC013731.1-201ENST00000604340 883 ntBASIC7.48□□□□□ -1.21
CIITAP33076 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 MAPK10-344ENST00000641718 3746 ntBASIC7.48□□□□□ -1.21
CIITAP33076 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
CIITAP33076 AL589993.1-201ENST00000407450 2524 ntBASIC7.48□□□□□ -1.21
CIITAP33076 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.48□□□□□ -1.21
CIITAP33076 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CIITAP33076 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms